RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-222ENST00000482096 SPTLC2O15270 562 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 GREM1O60565 184 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 PPP6R2O75170 966 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 ZNF217O75362 1048 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 CFIP05156 583 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 HOXB2P14652 356 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 AP3M2P53677 418 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 ATXN3P54252 364 aaPredicted RBP9.08□□□□□ -0.96
UBE2F-222ENST00000482096 SIM1P81133 766 aaPredicted RBP9.08□□□□□ -0.96
UBE2F-222ENST00000482096 RPL6Q02878 288 aaKnown RBP9.08□□□□□ -0.96
UBE2F-222ENST00000482096 GFPT1Q06210 699 aaPredicted RBP9.08□□□□□ -0.96
UBE2F-222ENST00000482096 ZNF33AQ06730 810 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 STK38Q15208 465 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 OCLNQ16625 522 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 BMT2Q1RMZ1 405 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 ANO4Q32M45 955 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 C10orf76Q5T2E6 689 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 KIAA1211LQ6NV74 962 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 UNC13DQ70J99 1090 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 HTR3DQ70Z44 454 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 MIB1Q86YT6 1006 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 FUKQ8N0W3 1084 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 HDDC3Q8N4P3 179 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 DEFB119Q8N690 84 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 IQUBQ8NA54 791 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 ZMIZ2Q8NF64 920 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 PLEKHO2Q8TD55 490 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 DHX58Q96C10 678 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 SMARCD1Q96GM5 515 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 INTS4Q96HW7 963 aaKnown RBP9.08□□□□□ -0.96
UBE2F-222ENST00000482096 MED10Q9BTT4 135 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 SMYD3Q9H7B4 428 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 GPAMQ9HCL2 828 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 CD248Q9HCU0 757 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 GMIPQ9P107 970 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 CALCOCO1Q9P1Z2 691 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 IGF2RP11717 2491 aa9.08□□□□□ -0.96
UBE2F-222ENST00000482096 PVALEFA0A1B0GWK0 134 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 A0A1W2PQD8 194 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 SERTM1A2A2V5 107 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 SLC35F4A4IF30 521 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 FAM221BA6H8Z2 402 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 H0Y626 953 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 STX6O43752 255 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 CACNG3O60359 315 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 TLR5O60602 858 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 EXOC3O60645 756 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 OPHN1O60890 802 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 PHACTR2O75167 634 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 BEST1O76090 585 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 TRIM16O95361 564 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 C4BPAP04003 597 aaKnown RBP9.07□□□□□ -0.96
UBE2F-222ENST00000482096 IRF1P10914 325 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 CD59P13987 128 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 NOS2P35228 1153 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 RDXP35241 583 aaKnown RBP9.07□□□□□ -0.96
UBE2F-222ENST00000482096 WASP42768 502 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 CASP4P49662 377 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 PGFP49763 221 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 HNRNPDQ14103 355 aaKnown RBP9.07□□□□□ -0.96
UBE2F-222ENST00000482096 TEAD4Q15561 434 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 KNOP1Q1ED39 458 aaKnown RBP9.07□□□□□ -0.96
UBE2F-222ENST00000482096 ZNF699Q32M78 642 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 ZNF667Q5HYK9 610 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 EGFLAMQ63HQ2 1017 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 GRAMD4Q6IC98 578 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 SDE2Q6IQ49 451 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 SHC4Q6S5L8 630 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 SLC41A1Q8IVJ1 513 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 CHPFQ8IZ52 775 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 CRYBG2Q8N1P7 616 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 MINDY1Q8N5J2 469 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 PARD3BQ8TEW8 1205 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 IPO4Q8TEX9 1081 aaKnown RBP9.07□□□□□ -0.96
UBE2F-222ENST00000482096 ZCCHC14Q8WYQ9 949 aaKnown RBP9.07□□□□□ -0.96
UBE2F-222ENST00000482096 ZNF419Q96HQ0 510 aaPredicted RBP9.07□□□□□ -0.96
UBE2F-222ENST00000482096 XPO6Q96QU8 1125 aaKnown RBP9.07□□□□□ -0.96
UBE2F-222ENST00000482096 ACOX2Q99424 681 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 SMOQ99835 787 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 GABRG3Q99928 467 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 GTPBP2Q9BX10 602 aaKnown RBP9.07□□□□□ -0.96
UBE2F-222ENST00000482096 SDCBP2Q9H190 292 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 FBXO44Q9H4M3 255 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 CSNK1G1Q9HCP0 422 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 FSCN3Q9NQT6 498 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 TLR8Q9NR97 1041 aaKnown RBP9.07□□□□□ -0.96
UBE2F-222ENST00000482096 KRT82Q9NSB4 513 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 DNAJC17Q9NVM6 304 aaKnown RBP9.07□□□□□ -0.96
UBE2F-222ENST00000482096 MARK1Q9P0L2 795 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 WDR35Q9P2L0 1181 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 KLK13Q9UKR3 277 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 MYO18AQ92614 2054 aaKnown RBP9.07□□□□□ -0.96
UBE2F-222ENST00000482096 MYOFQ9NZM1 2061 aa9.07□□□□□ -0.96
UBE2F-222ENST00000482096 PLXND1Q9Y4D7 1925 aa9.06□□□□□ -0.96
UBE2F-222ENST00000482096 LRRIQ3A6PVS8 624 aaPredicted RBP9.06□□□□□ -0.96
UBE2F-222ENST00000482096 PRRT4C9JH25 899 aa9.06□□□□□ -0.96
UBE2F-222ENST00000482096 NEDD8-MDP1E9PL57 170 aa9.06□□□□□ -0.96
UBE2F-222ENST00000482096 GFRA2O00451 464 aa9.06□□□□□ -0.96
UBE2F-222ENST00000482096 CUTAO60888 179 aa9.06□□□□□ -0.96
UBE2F-222ENST00000482096 GJB3O75712 270 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms