RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 TYMPP19971 482 aa15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 ADRA1BP35368 520 aa15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 AIF1P55008 147 aa15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 FAXCQ5TGI0 409 aa15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 HEATR6Q6AI08 1181 aaKnown RBP15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 TADA2BQ86TJ2 420 aa15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 LRRTM3Q86VH5 581 aa15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 ZNF280BQ86YH2 543 aa15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 TDRPQ86YL5 185 aa15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 SRRM1Q8IYB3 904 aaKnown RBP15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 ATXN2LQ8WWM7 1075 aaKnown RBP15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 EDEM1Q92611 657 aa15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 PKMYT1Q99640 499 aa15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 PPCSQ9HAB8 311 aa15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 DDIT4Q9NX09 232 aa15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 EURLQ9NYK6 297 aa15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 RRN3Q9NYV6 651 aa15.91■□□□□ 0.14
RPUSD3-215ENST00000475470 TMEM120BA0PK00 339 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 ARVCFO00192 962 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 EEF2KO00418 725 aaKnown RBP15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 DDHD2O94830 711 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 BRAFP15056 766 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 GCAP28676 217 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 GRK4P32298 578 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 YWHAHQ04917 246 aaPredicted RBP15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 NR1H3Q13133 447 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 NOMO2Q5JPE7 1267 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 CLLU1OSQ5K130 101 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 TFB1MQ8WVM0 346 aaKnown RBP15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 LINC01599Q8WXQ3 324 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 IRGQQ8WZA9 623 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 PCDHB8Q9UN66 801 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 HACD1B0YJ81 288 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 GCATO75600 419 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 F9P00740 461 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 ARHGEF6Q15052 776 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 VPS52Q8N1B4 723 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 PRMT1Q99873 361 aaKnown RBP15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 WDR83Q9BRX9 315 aaKnown RBP15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 FRMD8Q9BZ67 464 aaPredicted RBP15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 ETNK1Q9HBU6 452 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 WDR6Q9NNW5 1121 aaKnown RBP15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 SLC24A2Q9UI40 661 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 RABGEF1Q9UJ41 708 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 CHMP2BQ9UQN3 213 aa15.9■□□□□ 0.14
RPUSD3-215ENST00000475470 RASA4BC9J798 803 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 KBTBD13C9JR72 458 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 RASA4O43374 803 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 DGKIO75912 1065 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 APRTP07741 180 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 ELK3P41970 407 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 GEMIN4P57678 1058 aaKnown RBP15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 FAM189BP81408 668 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 ARL13BQ3SXY8 428 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 PM20D1Q6GTS8 502 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 VSTM1Q6UX27 236 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 LRRC8DQ7L1W4 858 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 BHLHA9Q7RTU4 235 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 SPATA2LQ8IUW3 424 aaPredicted RBP15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 MAML1Q92585 1016 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 NTAN1Q96AB6 310 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 MRRFQ96E11 262 aaKnown RBP15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 PGAP3Q96FM1 320 aaPredicted RBP15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 CHMP6Q96FZ7 201 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 FAM193BQ96PV7 902 aaPredicted RBP15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 FTHL17Q9BXU8 183 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 FBXW11Q9UKB1 542 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 ACTL7BQ9Y614 415 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 FRMPD3Q5JV73 1810 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 C5orf60A6NFR6 353 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 MFSD11O43934 449 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 B4GALT3O60512 393 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 TSHRP16473 764 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 MAP2K2P36507 400 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 OR1G1P47890 313 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 BSPRYQ5W0U4 402 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 C4orf50Q6ZRC1 276 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 ARHGEF18Q6ZSZ5 1173 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 RFX8Q6ZV50 586 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 CPLX4Q7Z7G2 160 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 ANKRD42Q8N9B4 389 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 MGARPQ8TDB4 240 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 FBF1Q8TES7 1133 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 DYDC1Q8WWB3 177 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 HTR3CQ8WXA8 447 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 OLFM3Q96PB7 478 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 PNPLA8Q9NP80 782 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 KANSL3Q9P2N6 904 aa15.89■□□□□ 0.13
RPUSD3-215ENST00000475470 CEP350Q5VT06 3117 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 FKTNO75072 461 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 SELPP16109 830 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 KRT15P19012 456 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 IFNAR2P48551 515 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 DSC1Q08554 894 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 SCAPQ12770 1279 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 KLHL38Q2WGJ6 581 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 LGMNQ99538 433 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 COLEC11Q9BWP8 271 aa15.88■□□□□ 0.13
RPUSD3-215ENST00000475470 WDCPQ9H6R7 721 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms