RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 RARS2Q5T160 578 aaKnown RBP9.9□□□□□ -0.82
CDH23-211ENST00000475158 PTRHD1Q6GMV3 140 aaKnown RBP9.9□□□□□ -0.82
CDH23-211ENST00000475158 DEFB128Q7Z7B8 93 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 APLFQ8IW19 511 aaPredicted RBP9.9□□□□□ -0.82
CDH23-211ENST00000475158 LPPQ93052 612 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 ERLEC1Q96DZ1 483 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 ABHD16BQ9H3Z7 469 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 DCLRE1BQ9H816 532 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 DDX28Q9NUL7 540 aaKnown RBP9.9□□□□□ -0.82
CDH23-211ENST00000475158 KIAA1257Q9ULG3 409 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 ARHGAP26Q9UNA1 814 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 DNM1LO00429 736 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 CLDN5O00501 218 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 DPYSL4O14531 572 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 ERVK-10P10266 1014 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 ODC1P11926 461 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 HOXD10P28358 340 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 RPL22P35268 128 aaKnown RBP9.9□□□□□ -0.82
CDH23-211ENST00000475158 COPAP53621 1224 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 ZNF268Q14587 947 aaPredicted RBP9.9□□□□□ -0.82
CDH23-211ENST00000475158 FAM83EQ2M2I3 478 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 FUT11Q495W5 492 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 IQCKQ8N0W5 287 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 GIPC2Q8TF65 315 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 LRRC15Q8TF66 581 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 NDRG1Q92597 394 aaKnown RBP9.9□□□□□ -0.82
CDH23-211ENST00000475158 CATSPER2Q96P56 530 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 ILKAPQ9H0C8 392 aaPredicted RBP9.9□□□□□ -0.82
CDH23-211ENST00000475158 ASB7Q9H672 318 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 PNMA8BQ9ULN7 279 aaPredicted RBP9.9□□□□□ -0.82
CDH23-211ENST00000475158 LTN1O94822 1766 aa9.9□□□□□ -0.82
CDH23-211ENST00000475158 XPO1O14980 1071 aaKnown RBP9.9□□□□□ -0.83
CDH23-211ENST00000475158 ASMTLO95671 621 aa9.9□□□□□ -0.83
CDH23-211ENST00000475158 MCF2P10911 925 aa9.9□□□□□ -0.83
CDH23-211ENST00000475158 EIF4BP23588 611 aaKnown RBP9.9□□□□□ -0.83
CDH23-211ENST00000475158 SCNN1GP51170 649 aa9.9□□□□□ -0.83
CDH23-211ENST00000475158 ACVR2BQ13705 512 aa9.9□□□□□ -0.83
CDH23-211ENST00000475158 DPYSL3Q14195 570 aa9.9□□□□□ -0.83
CDH23-211ENST00000475158 CTXN3Q4LDR2 81 aa9.9□□□□□ -0.83
CDH23-211ENST00000475158 DUPD1Q68J44 220 aa9.9□□□□□ -0.83
CDH23-211ENST00000475158 OVOS1Q6IE37 1185 aa9.9□□□□□ -0.83
CDH23-211ENST00000475158 SLC9A9Q8IVB4 645 aa9.9□□□□□ -0.83
CDH23-211ENST00000475158 HTR3CQ8WXA8 447 aa9.9□□□□□ -0.83
CDH23-211ENST00000475158 USP13Q92995 863 aaPredicted RBP9.9□□□□□ -0.83
CDH23-211ENST00000475158 TUBGCP3Q96CW5 907 aa9.9□□□□□ -0.83
CDH23-211ENST00000475158 MRIQ9BWK5 157 aa9.9□□□□□ -0.83
CDH23-211ENST00000475158 RUBCNLQ9H714 662 aa9.9□□□□□ -0.83
CDH23-211ENST00000475158 LRRC40Q9H9A6 602 aa9.9□□□□□ -0.83
CDH23-211ENST00000475158 CDY2AQ9Y6F7 541 aa9.9□□□□□ -0.83
CDH23-211ENST00000475158 CDY1Q9Y6F8 540 aa9.9□□□□□ -0.83
CDH23-211ENST00000475158 STX7O15400 261 aaKnown RBP9.89□□□□□ -0.83
CDH23-211ENST00000475158 MAN1A2O60476 641 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 CKMP06732 381 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 CPA3P15088 417 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 CCR1P32246 355 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 DNAL1Q4LDG9 190 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 HYIQ5T013 277 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 CRELD2Q6UXH1 353 aaPredicted RBP9.89□□□□□ -0.83
CDH23-211ENST00000475158 EXOC3L1Q86VI1 746 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 DCP1BQ8IZD4 617 aaKnown RBP9.89□□□□□ -0.83
CDH23-211ENST00000475158 GPC2Q8N158 579 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 SAMD3Q8N6K7 520 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 CMTM5Q96DZ9 223 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 VCPIP1Q96JH7 1222 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 LGMNQ99538 433 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 APBA2Q99767 749 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 PHACTR1Q9C0D0 580 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 FAM53CQ9NYF3 392 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 VANGL2Q9ULK5 521 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 LRCH1Q9Y2L9 728 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 IFT172Q9UG01 1749 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 CBX4O00257 560 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 CXCL11O14625 94 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 FLOT2Q14254 428 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 CELF3Q5SZQ8 465 aaKnown RBP9.89□□□□□ -0.83
CDH23-211ENST00000475158 SDHAF4Q5VUM1 108 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 FAM183BPQ6ZVS7 135 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 PIGZQ86VD9 579 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 GFM2Q969S9 779 aaKnown RBP9.89□□□□□ -0.83
CDH23-211ENST00000475158 SH3KBP1Q96B97 665 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 PGM2Q96G03 612 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 SNRNP25Q9BV90 132 aaKnown RBP9.89□□□□□ -0.83
CDH23-211ENST00000475158 ACSS2Q9NR19 701 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 MRGBPQ9NV56 204 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 CLIC5Q9NZA1 410 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 CDYLQ9Y232 598 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 PRR23AA6NEV1 266 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 A8MX80 341 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 APOC4-APOC2K7ER74 178 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 GLRA3O75311 464 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 APOC2P02655 101 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 SERPIND1P05546 499 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 YBX3P16989 372 aaKnown RBP eCLIP9.89□□□□□ -0.83
CDH23-211ENST00000475158 ARF4P18085 180 aaPredicted RBP9.89□□□□□ -0.83
CDH23-211ENST00000475158 ITGB6P18564 788 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 RGS2P41220 211 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 GJA8P48165 433 aa9.89□□□□□ -0.83
CDH23-211ENST00000475158 ALDH7A1P49419 539 aaKnown RBP9.89□□□□□ -0.83
CDH23-211ENST00000475158 HARS2P49590 506 aaKnown RBP9.89□□□□□ -0.83
CDH23-211ENST00000475158 MRPS15P82914 257 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms