RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 P3H1Q32P28 736 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 DENND5BQ6ZUT9 1274 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 PRUNE1Q86TP1 453 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 TMPRSS4Q9NRS4 437 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 COL4A4P53420 1690 aaPredicted RBP20.53■□□□□ 0.88
SSR1-204ENST00000474597 EEF2KO00418 725 aaKnown RBP20.53■□□□□ 0.88
SSR1-204ENST00000474597 SOAT2O75908 522 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 EFEMP2O95967 443 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 ZSCAN5DPP0CG00 497 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 ETS1P14921 441 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 YWHAQP27348 245 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 CXCR3P49682 368 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 SCAPQ12770 1279 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 DUSP4Q13115 394 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 PPIGQ13427 754 aaKnown RBP eCLIP20.53■□□□□ 0.888e-18■□□□□ 9
SSR1-204ENST00000474597 SLC8B1Q6J4K2 584 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 SCD5Q86SK9 330 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 RNF168Q8IYW5 571 aaPredicted RBP20.53■□□□□ 0.88
SSR1-204ENST00000474597 SLC39A11Q8N1S5 342 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 COLGALT1Q8NBJ5 622 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 FBXO32Q969P5 355 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 TKTL2Q9H0I9 626 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 C10orf88Q9H8K7 445 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 RC3H2Q9HBD1 1191 aaKnown RBP20.53■□□□□ 0.88
SSR1-204ENST00000474597 SPG21Q9NZD8 308 aa20.53■□□□□ 0.88
SSR1-204ENST00000474597 MRPL42Q9Y6G3 142 aaKnown RBP20.53■□□□□ 0.88
SSR1-204ENST00000474597 ZNF638Q14966 1978 aaKnown RBP20.53■□□□□ 0.88
SSR1-204ENST00000474597 PPFIA2O75334 1257 aa20.52■□□□□ 0.88
SSR1-204ENST00000474597 AMPD1P23109 780 aa20.52■□□□□ 0.88
SSR1-204ENST00000474597 STIP1P31948 543 aaKnown RBP20.52■□□□□ 0.88
SSR1-204ENST00000474597 OR1D2P34982 312 aa20.52■□□□□ 0.88
SSR1-204ENST00000474597 HSD17B3P37058 310 aa20.52■□□□□ 0.88
SSR1-204ENST00000474597 NR2C2P49116 596 aa20.52■□□□□ 0.88
SSR1-204ENST00000474597 GOLGA6L1Q8N7Z2 621 aa20.52■□□□□ 0.88
SSR1-204ENST00000474597 GLIS1Q8NBF1 620 aa20.52■□□□□ 0.88
SSR1-204ENST00000474597 GPR152Q8TDT2 470 aa20.52■□□□□ 0.88
SSR1-204ENST00000474597 SPATA17Q96L03 361 aa20.52■□□□□ 0.88
SSR1-204ENST00000474597 VN1R3Q9BXE9 311 aa20.52■□□□□ 0.88
SSR1-204ENST00000474597 TSPYL1Q9H0U9 437 aa20.52■□□□□ 0.88
SSR1-204ENST00000474597 MED4Q9NPJ6 270 aa20.52■□□□□ 0.88
SSR1-204ENST00000474597 DNALI1O14645 258 aaPredicted RBP20.51■□□□□ 0.87
SSR1-204ENST00000474597 RPL17P18621 184 aaKnown RBP20.51■□□□□ 0.87
SSR1-204ENST00000474597 EN2P19622 333 aaPredicted RBP20.51■□□□□ 0.87
SSR1-204ENST00000474597 ACTN2P35609 894 aa20.51■□□□□ 0.87
SSR1-204ENST00000474597 GGCXP38435 758 aa20.51■□□□□ 0.87
SSR1-204ENST00000474597 GLUD2P49448 558 aa20.51■□□□□ 0.87
SSR1-204ENST00000474597 SLMAPQ14BN4 828 aa20.51■□□□□ 0.87
SSR1-204ENST00000474597 BZW1Q7L1Q6 419 aaKnown RBP20.51■□□□□ 0.87
SSR1-204ENST00000474597 CCDC25Q86WR0 208 aa20.51■□□□□ 0.87
SSR1-204ENST00000474597 UNC45BQ8IWX7 931 aa20.51■□□□□ 0.87
SSR1-204ENST00000474597 ZIM3Q96PE6 472 aa20.51■□□□□ 0.87
SSR1-204ENST00000474597 SMOC2Q9H3U7 446 aa20.51■□□□□ 0.87
SSR1-204ENST00000474597 NMUR1Q9HB89 426 aa20.51■□□□□ 0.87
SSR1-204ENST00000474597 COMMD8Q9NX08 183 aa20.51■□□□□ 0.87
SSR1-204ENST00000474597 WDR27A2RRH5 827 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 CFAP69A5D8W1 941 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 IRAK2O43187 625 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 FGBP02675 491 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 OAS2P29728 719 aaKnown RBP20.5■□□□□ 0.87
SSR1-204ENST00000474597 PMS2P54278 862 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 GDF10P55107 478 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 TPI1P60174 286 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 USP46P62068 366 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 BRMS1LQ5PSV4 323 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 NCBP2-AS2Q69YL0 99 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 FAM71DQ8N9W8 422 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 HERC2P3Q9BVR0 1158 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 MCOLN1Q9GZU1 580 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 CRISPLD1Q9H336 500 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 ARHGEF4Q9NR80 690 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 AAASQ9NRG9 546 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 GMIPQ9P107 970 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 PCDH10Q9P2E7 1040 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 SFMBT1Q9UHJ3 866 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 TPX2Q9ULW0 747 aaKnown RBP20.5■□□□□ 0.87
SSR1-204ENST00000474597 GREB1Q4ZG55 1949 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 ADAM12O43184 909 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 IGLV3-25P01717 112 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 TUFMP49411 452 aaKnown RBP20.5■□□□□ 0.87
SSR1-204ENST00000474597 ZNF135P52742 658 aaPredicted RBP20.5■□□□□ 0.87
SSR1-204ENST00000474597 CBX1P83916 185 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 SPDYCQ5MJ68 293 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 RFX8Q6ZV50 586 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 PCGF5Q86SE9 256 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 CDKL3Q8IVW4 592 aaPredicted RBP20.5■□□□□ 0.87
SSR1-204ENST00000474597 SERPINB11Q96P15 392 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 EPAS1Q99814 870 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 TLR8Q9NR97 1041 aaKnown RBP20.5■□□□□ 0.87
SSR1-204ENST00000474597 TMEM51Q9NW97 253 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 IL37Q9NZH6 218 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 PLAAQ9Y263 795 aa20.5■□□□□ 0.87
SSR1-204ENST00000474597 PTPRSQ13332 1948 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 OPA1O60313 960 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 MAP3K6O95382 1288 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 VNN2O95498 520 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 URODP06132 367 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 PPM1AP35813 382 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 PGFP49763 221 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 PSEN1P49768 467 aa20.49■□□□□ 0.87
SSR1-204ENST00000474597 DSG1Q02413 1049 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms