RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 VAV1P15498 845 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 GOT1P17174 413 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 AMPD1P23109 780 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 ELK3P41970 407 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 HCAR3P49019 387 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 GLUD2P49448 558 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 ZNF135P52742 658 aaPredicted RBP10.16□□□□□ -0.78
USP39-214ENST00000474572 ACLYP53396 1101 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 EIF4EBP2Q13542 120 aaPredicted RBP10.16□□□□□ -0.78
USP39-214ENST00000474572 ITIH4Q14624 930 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 PKN2Q16513 984 aaKnown RBP10.16□□□□□ -0.78
USP39-214ENST00000474572 BBS9Q3SYG4 887 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 DCAF6Q58WW2 860 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 GKAP1Q5VSY0 366 aaPredicted RBP10.16□□□□□ -0.78
USP39-214ENST00000474572 KCNT2Q6UVM3 1135 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 RGS9BPQ6ZS82 235 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 ARHGEF18Q6ZSZ5 1173 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 GPRIN1Q7Z2K8 1008 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 RNF180Q86T96 592 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 CAND1Q86VP6 1230 aaKnown RBP10.16□□□□□ -0.78
USP39-214ENST00000474572 IGDCC3Q8IVU1 814 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 SRRM1Q8IYB3 904 aaKnown RBP10.16□□□□□ -0.78
USP39-214ENST00000474572 CACNA2D3Q8IZS8 1091 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 PYROXD2Q8N2H3 581 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 SMC1BQ8NDV3 1235 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 PXYLP1Q8TE99 480 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 FBF1Q8TES7 1133 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 DCAKDQ8WVC6 231 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 RSPH1Q8WYR4 309 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 NDRG1Q92597 394 aaKnown RBP10.16□□□□□ -0.78
USP39-214ENST00000474572 MYLPFQ96A32 169 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 SUSD3Q96L08 255 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 MAGEB18Q96M61 343 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 PAFAH2Q99487 392 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 ADAM2Q99965 735 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 TSEN34Q9BSV6 310 aaKnown RBP10.16□□□□□ -0.78
USP39-214ENST00000474572 NSRP1Q9H0G5 558 aaKnown RBP10.16□□□□□ -0.78
USP39-214ENST00000474572 PLAC1Q9HBJ0 212 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 ETNK1Q9HBU6 452 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 EIF2B3Q9NR50 452 aaKnown RBP10.16□□□□□ -0.78
USP39-214ENST00000474572 RGS18Q9NS28 235 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 PIGVQ9NUD9 493 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 TBK1Q9UHD2 729 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 TTLL3Q9Y4R7 772 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 MYO16Q9Y6X6 1858 aa10.16□□□□□ -0.78
USP39-214ENST00000474572 A0A0A0MRY4 1105 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 YJEFN3A6XGL0 299 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 FOXO6A8MYZ6 492 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 KBTBD13C9JR72 458 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 E7ENQ6 273 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 POC1B-GALNT4F8VUJ3 575 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 METTL18O95568 372 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 CPP00450 1065 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 IGLV3-25P01717 112 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 MLNP12872 115 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 ELNP15502 786 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 ATP2A2P16615 1042 aaKnown RBP10.15□□□□□ -0.78
USP39-214ENST00000474572 PRKCHP24723 683 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 ADRA1BP35368 520 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 FDFT1P37268 417 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 BRCC3P46736 316 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 WDR4P57081 412 aaKnown RBP10.15□□□□□ -0.78
USP39-214ENST00000474572 FAM189BP81408 668 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 CDK16Q00536 496 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 DSC1Q08554 894 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 EFTUD2Q15029 972 aaKnown RBP eCLIP10.15□□□□□ -0.783e-8■■□□□ 13.7
USP39-214ENST00000474572 MAPRE1Q15691 268 aaKnown RBP10.15□□□□□ -0.78
USP39-214ENST00000474572 LACTB2Q53H82 288 aaPredicted RBP10.15□□□□□ -0.78
USP39-214ENST00000474572 HP1BP3Q5SSJ5 553 aaPredicted RBP10.15□□□□□ -0.78
USP39-214ENST00000474572 HEATR6Q6AI08 1181 aaKnown RBP10.15□□□□□ -0.78
USP39-214ENST00000474572 DCLRE1AQ6PJP8 1040 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 C3orf62Q6ZUJ4 267 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 CPLX4Q7Z7G2 160 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 METTL23Q86XA0 190 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 PALM2Q8IXS6 379 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 VPS52Q8N1B4 723 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 CCDC110Q8TBZ0 833 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 TFB1MQ8WVM0 346 aaKnown RBP10.15□□□□□ -0.78
USP39-214ENST00000474572 SLC44A1Q8WWI5 657 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 HTR3CQ8WXA8 447 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 LINC01599Q8WXQ3 324 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 ALKBH8Q96BT7 664 aaKnown RBP10.15□□□□□ -0.78
USP39-214ENST00000474572 SPATA13Q96N96 652 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 KCNK16Q96T55 309 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 CYTH2Q99418 400 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 TRABDQ9H4I3 376 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 DMAP1Q9NPF5 467 aaPredicted RBP10.15□□□□□ -0.78
USP39-214ENST00000474572 TRMT13Q9NUP7 481 aaKnown RBP10.15□□□□□ -0.78
USP39-214ENST00000474572 FBXW11Q9UKB1 542 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 PCDHB8Q9UN66 801 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 CHMP2BQ9UQN3 213 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 MFHAS1Q9Y4C4 1052 aa10.15□□□□□ -0.78
USP39-214ENST00000474572 TIMM13Q9Y5L4 95 aaPredicted RBP10.15□□□□□ -0.78
USP39-214ENST00000474572 FNDC1Q4ZHG4 1894 aaPredicted RBP10.15□□□□□ -0.79
USP39-214ENST00000474572 TCRBV9S1A1TA0A576 114 aa10.14□□□□□ -0.79
USP39-214ENST00000474572 I6L893 689 aaPredicted RBP10.14□□□□□ -0.79
USP39-214ENST00000474572 TRDMT1O14717 391 aaKnown RBP10.14□□□□□ -0.79
USP39-214ENST00000474572 SNX3O60493 162 aa10.14□□□□□ -0.79
USP39-214ENST00000474572 OPHN1O60890 802 aa10.14□□□□□ -0.79
USP39-214ENST00000474572 B3GAT3O94766 335 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms