RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 TCEAL9Q9UHQ7 104 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 ANAPC4Q9UJX5 808 aa4.04□□□□□ -1.76
PRPF40A-207ENST00000471701 LACTBL1A8MY62 500 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 THAP12O43422 761 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 COQ9O75208 318 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 ZBED1O96006 694 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 MBPP02686 304 aaPredicted RBP4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 ANXA2P07355 339 aaKnown RBP4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 ST6GAL1P15907 406 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 MMP8P22894 467 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 TBXAS1P24557 533 aaPredicted RBP4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 PEX2P28328 305 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 PBX1P40424 430 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 RAE1P78406 368 aaKnown RBP4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 MTAPQ13126 283 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 KCNJ12Q14500 433 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 NFE2Q16621 373 aaPredicted RBP4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 CHST15Q7LFX5 561 aaPredicted RBP4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 TMEM199Q8N511 208 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 WIPF2Q8TF74 440 aaPredicted RBP4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 PMM1Q92871 262 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 CELF1Q92879 486 aaKnown RBP4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 TMEM204Q9BSN7 226 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 SELENOOQ9BVL4 669 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 TTLL2Q9BWV7 592 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 ZBTB26Q9HCK0 441 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 MLXIPLQ9NP71 852 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 ABHD10Q9NUJ1 306 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 ASNSD1Q9NWL6 643 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 PCDHB2Q9Y5E7 798 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 SNX13Q9Y5W8 968 aa4.03□□□□□ -1.76
PRPF40A-207ENST00000471701 FRMPD2Q68DX3 1309 aaPredicted RBP4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 TMEM272A0A1B0GTI8 110 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 C16orf96A6NNT2 1141 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 A6NNZ2 444 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 ZNF814B7Z6K7 855 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 PRSS44E7EML9 344 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 TPP1O14773 563 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 SCGB1D2O95969 90 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 ENO1P06733 434 aaKnown RBP4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 ATICP31939 592 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 HTR7P34969 479 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 HOXD12P35452 270 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 IGHMBP2P38935 993 aaKnown RBP4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 PGGT1BP53609 377 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 BFSP2Q13515 415 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 AASDHQ4L235 1098 aaPredicted RBP4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 GLE1Q53GS7 698 aaKnown RBP4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 PDXDC1Q6P996 788 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 RFX8Q6ZV50 586 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 TRAPPC11Q7Z392 1133 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 ADHFE1Q8IWW8 467 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 PELI3Q8N2H9 469 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 CCDC150Q8NCX0 1101 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 IGFBPL1Q8WX77 278 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 AKAP1Q92667 903 aaKnown RBP eCLIP4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 NTPCRQ9BSD7 190 aaKnown RBP4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 RNF26Q9BY78 433 aaPredicted RBP4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 TRIM2Q9C040 744 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 NUP62CLQ9H1M0 184 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 MRPL44Q9H9J2 332 aaKnown RBP4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 MOV10Q9HCE1 1003 aaKnown RBP4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 FZD3Q9NPG1 666 aa4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 DDX20Q9UHI6 824 aaKnown RBP4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 THRAP3Q9Y2W1 955 aaKnown RBP4.02□□□□□ -1.77
PRPF40A-207ENST00000471701 ZNF335Q9H4Z2 1342 aaPredicted RBP4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 TRBV5-3A0A0A0MS03 114 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 TLX3O43711 291 aaPredicted RBP4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 EPN2O95208 641 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 TNFRSF1BP20333 461 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 DRD1P21728 446 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 MATN1P21941 496 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 IDUAP35475 653 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 PPATQ06203 517 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 SEMA3BQ13214 749 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 FHL3Q13643 280 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 PTGR1Q14914 329 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 DLGAP5Q15398 846 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 RRAGBQ5VZM2 374 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 KRT28Q7Z3Y7 464 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 RAVER1Q8IY67 606 aaKnown RBP4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 FAM177A1Q8N128 213 aaPredicted RBP4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 CAMK1GQ96NX5 476 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 HTATIP2Q9BUP3 242 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 UNKQ9C0B0 810 aaKnown RBP4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 MSRB1Q9NZV6 116 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 PCDHA12Q9UN75 941 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 PROCRQ9UNN8 238 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 EID1Q9Y6B2 187 aa4.01□□□□□ -1.77
PRPF40A-207ENST00000471701 SPATA31A5Q5VU36 1347 aa4□□□□□ -1.77
PRPF40A-207ENST00000471701 SPATA31A7Q8IWB4 1347 aa4□□□□□ -1.77
PRPF40A-207ENST00000471701 EME2A4GXA9 379 aaPredicted RBP4□□□□□ -1.77
PRPF40A-207ENST00000471701 DPPA5A6NC42 116 aa4□□□□□ -1.77
PRPF40A-207ENST00000471701 AREL1O15033 823 aa4□□□□□ -1.77
PRPF40A-207ENST00000471701 ZSCAN9O15535 394 aaPredicted RBP4□□□□□ -1.77
PRPF40A-207ENST00000471701 S100BP04271 92 aaPredicted RBP4□□□□□ -1.77
PRPF40A-207ENST00000471701 AKR1A1P14550 325 aa4□□□□□ -1.77
PRPF40A-207ENST00000471701 GPS1Q13098 491 aa4□□□□□ -1.77
PRPF40A-207ENST00000471701 INPP5JQ15735 1006 aaPredicted RBP4□□□□□ -1.77
PRPF40A-207ENST00000471701 GFOD2Q3B7J2 385 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms