RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 RAE1P78406 368 aaKnown RBP4.36□□□□□ -1.71
VPS50-209ENST00000467326 SLC14A1Q13336 389 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 PICALMQ13492 652 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 MYBPC2Q14324 1141 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 SEC23BQ15437 767 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 GRAMD1BQ3KR37 738 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 ARL13BQ3SXY8 428 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.36□□□□□ -1.71
VPS50-209ENST00000467326 FBXO38Q6PIJ6 1188 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 RANBP10Q6VN20 620 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 KIAA0408Q6ZU52 694 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 KRT73Q86Y46 540 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 SMAP1Q8IYB5 467 aaPredicted RBP4.36□□□□□ -1.71
VPS50-209ENST00000467326 SVIPQ8NHG7 77 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 ZNF398Q8TD17 642 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 DENND1AQ8TEH3 1009 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 PARD3BQ8TEW8 1205 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 RIPOR3Q96MK2 946 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 ADGRE3Q9BY15 652 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.36□□□□□ -1.71
VPS50-209ENST00000467326 LZTS1Q9Y250 596 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 MAN2B2Q9Y2E5 1009 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 BTBD3Q9Y2F9 522 aa4.36□□□□□ -1.71
VPS50-209ENST00000467326 CYP2D7A0A087X1C5 515 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 FAM234BA2RU67 622 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 FGF18O76093 207 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 PECAM1P16284 738 aaPredicted RBP4.35□□□□□ -1.71
VPS50-209ENST00000467326 ATF7P17544 494 aaPredicted RBP4.35□□□□□ -1.71
VPS50-209ENST00000467326 ATP5F1P24539 256 aaPredicted RBP4.35□□□□□ -1.71
VPS50-209ENST00000467326 CASP2P42575 452 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 MMP13P45452 471 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 WDR5P61964 334 aaKnown RBP4.35□□□□□ -1.71
VPS50-209ENST00000467326 DNASE1L3Q13609 305 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 FHL3Q13643 280 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 MORC3Q14149 939 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 KPNB1Q14974 876 aaKnown RBP4.35□□□□□ -1.71
VPS50-209ENST00000467326 DAZAP2Q15038 168 aaPredicted RBP4.35□□□□□ -1.71
VPS50-209ENST00000467326 ARHGAP15Q53QZ3 475 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 FAM209BQ5JX69 171 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 TMTC4Q5T4D3 741 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 C10orf62Q5T681 223 aaPredicted RBP4.35□□□□□ -1.71
VPS50-209ENST00000467326 MEX3CQ5U5Q3 659 aaKnown RBP4.35□□□□□ -1.71
VPS50-209ENST00000467326 RAP1GAP2Q684P5 730 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 CCDC70Q6NSX1 233 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 C16orf71Q8IYS4 520 aaPredicted RBP4.35□□□□□ -1.71
VPS50-209ENST00000467326 MYRIPQ8NFW9 859 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 BRI3BPQ8WY22 251 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 MAP4K1Q92918 833 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 CUL5Q93034 780 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 GRAMD1AQ96CP6 724 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 KAZALD1Q96I82 304 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 CERS4Q9HA82 394 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 PPCSQ9HAB8 311 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 SAP30LQ9HAJ7 183 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 VPS45Q9NRW7 570 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 RGL1Q9NZL6 768 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 ZMYND8Q9ULU4 1186 aaPredicted RBP4.35□□□□□ -1.71
VPS50-209ENST00000467326 PHTF1Q9UMS5 762 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 PCDHB2Q9Y5E7 798 aa4.35□□□□□ -1.71
VPS50-209ENST00000467326 PODXLO00592 558 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 ZSCAN9O15535 394 aaPredicted RBP4.34□□□□□ -1.71
VPS50-209ENST00000467326 TOP3BO95985 862 aaKnown RBP4.34□□□□□ -1.71
VPS50-209ENST00000467326 VIPP01282 170 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 MBPP02686 304 aaPredicted RBP4.34□□□□□ -1.71
VPS50-209ENST00000467326 PTMAP06454 111 aaKnown RBP4.34□□□□□ -1.71
VPS50-209ENST00000467326 EEF1GP26641 437 aaKnown RBP4.34□□□□□ -1.71
VPS50-209ENST00000467326 TACR3P29371 465 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 PPM1FP49593 454 aaPredicted RBP4.34□□□□□ -1.71
VPS50-209ENST00000467326 NEK3P51956 506 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 AK2P54819 239 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 NSUN2Q08J23 767 aaKnown RBP eCLIP4.34□□□□□ -1.71
VPS50-209ENST00000467326 BFSP2Q13515 415 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 ATP1A4Q13733 1029 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 KCNJ12Q14500 433 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 TMEM95Q3KNT9 176 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 Q4G0T1 1027 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 TMEM196Q5HYL7 178 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 IZUMO3Q5VZ72 239 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 IL31Q6EBC2 164 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 ANO7Q6IWH7 933 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 CLASRPQ8N2M8 674 aaKnown RBP4.34□□□□□ -1.71
VPS50-209ENST00000467326 PRSS3P2Q8NHM4 247 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.34□□□□□ -1.71
VPS50-209ENST00000467326 ZNF566Q969W8 418 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 SLC39A13Q96H72 371 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 PRR11Q96HE9 360 aaPredicted RBP4.34□□□□□ -1.71
VPS50-209ENST00000467326 CCDC138Q96M89 665 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 RNF26Q9BY78 433 aaPredicted RBP4.34□□□□□ -1.71
VPS50-209ENST00000467326 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.34□□□□□ -1.71
VPS50-209ENST00000467326 VPS16Q9H269 839 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 ARL8BQ9NVJ2 186 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 TRNAU1APQ9NX07 287 aaKnown RBP4.34□□□□□ -1.71
VPS50-209ENST00000467326 TUBA8Q9NY65 449 aaPredicted RBP4.34□□□□□ -1.71
VPS50-209ENST00000467326 ZNF69Q9UC07 566 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 CEP83Q9Y592 693 aa4.34□□□□□ -1.71
VPS50-209ENST00000467326 OR2W5A6NFC9 320 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 FCHO1O14526 889 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 TIMM44O43615 452 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 MATN1P21941 496 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 GSTM5P46439 218 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms