RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 GTPBP1O00178 669 aaKnown RBP5.95□□□□□ -1.46
SMC4-205ENST00000465563 TPP1O14773 563 aa5.95□□□□□ -1.46
SMC4-205ENST00000465563 ST6GAL1P15907 406 aa5.95□□□□□ -1.46
SMC4-205ENST00000465563 RPL17P18621 184 aaKnown RBP5.95□□□□□ -1.46
SMC4-205ENST00000465563 TFEBP19484 476 aa5.95□□□□□ -1.46
SMC4-205ENST00000465563 DUSP1P28562 367 aa5.95□□□□□ -1.46
SMC4-205ENST00000465563 IDUAP35475 653 aa5.95□□□□□ -1.46
SMC4-205ENST00000465563 VPS41P49754 854 aa5.95□□□□□ -1.46
SMC4-205ENST00000465563 KCNJ12Q14500 433 aa5.95□□□□□ -1.46
SMC4-205ENST00000465563 NFE2Q16621 373 aaPredicted RBP5.95□□□□□ -1.46
SMC4-205ENST00000465563 RFX8Q6ZV50 586 aa5.95□□□□□ -1.46
SMC4-205ENST00000465563 B4GALNT4Q76KP1 1039 aa5.95□□□□□ -1.46
SMC4-205ENST00000465563 CHST15Q7LFX5 561 aaPredicted RBP5.95□□□□□ -1.46
SMC4-205ENST00000465563 STRBPQ96SI9 672 aaKnown RBP5.95□□□□□ -1.46
SMC4-205ENST00000465563 MRPL44Q9H9J2 332 aaKnown RBP5.95□□□□□ -1.46
SMC4-205ENST00000465563 MSRB1Q9NZV6 116 aa5.95□□□□□ -1.46
SMC4-205ENST00000465563 EPN2O95208 641 aa5.94□□□□□ -1.46
SMC4-205ENST00000465563 SLC3A2P08195 630 aaKnown RBP5.94□□□□□ -1.46
SMC4-205ENST00000465563 CDC25AP30304 524 aa5.94□□□□□ -1.46
SMC4-205ENST00000465563 PBX1P40424 430 aa5.94□□□□□ -1.46
SMC4-205ENST00000465563 SENP7Q9BQF6 1050 aa5.94□□□□□ -1.46
SMC4-205ENST00000465563 ZPBPQ9BS86 351 aa5.94□□□□□ -1.46
SMC4-205ENST00000465563 MOV10Q9HCE1 1003 aaKnown RBP5.94□□□□□ -1.46
SMC4-205ENST00000465563 HEYLQ9NQ87 328 aaPredicted RBP5.94□□□□□ -1.46
SMC4-205ENST00000465563 ASNSD1Q9NWL6 643 aa5.94□□□□□ -1.46
SMC4-205ENST00000465563 PCDHA12Q9UN75 941 aa5.94□□□□□ -1.46
SMC4-205ENST00000465563 PCDHB2Q9Y5E7 798 aa5.94□□□□□ -1.46
SMC4-205ENST00000465563 TRBV5-3A0A0A0MS03 114 aa5.93□□□□□ -1.46
SMC4-205ENST00000465563 TMEM272A0A1B0GTI8 110 aa5.93□□□□□ -1.46
SMC4-205ENST00000465563 LACTBL1A8MY62 500 aa5.93□□□□□ -1.46
SMC4-205ENST00000465563 UGDHO60701 494 aa5.93□□□□□ -1.46
SMC4-205ENST00000465563 ZC3H11AO75152 810 aaKnown RBP eCLIP5.93□□□□□ -1.46
SMC4-205ENST00000465563 ANXA2P07355 339 aaKnown RBP5.93□□□□□ -1.46
SMC4-205ENST00000465563 HOXD12P35452 270 aa5.93□□□□□ -1.46
SMC4-205ENST00000465563 ADHFE1Q8IWW8 467 aa5.93□□□□□ -1.46
SMC4-205ENST00000465563 ADGRF4Q8IZF3 695 aa5.93□□□□□ -1.46
SMC4-205ENST00000465563 B4GALNT2Q8NHY0 566 aa5.93□□□□□ -1.46
SMC4-205ENST00000465563 ABHD5Q8WTS1 349 aa5.93□□□□□ -1.46
SMC4-205ENST00000465563 AKAP1Q92667 903 aaKnown RBP eCLIP5.93□□□□□ -1.46
SMC4-205ENST00000465563 CELF1Q92879 486 aaKnown RBP5.93□□□□□ -1.46
SMC4-205ENST00000465563 CTAGE1Q96RT6 745 aa5.93□□□□□ -1.46
SMC4-205ENST00000465563 GATA5Q9BWX5 397 aaPredicted RBP5.93□□□□□ -1.46
SMC4-205ENST00000465563 ZNF112Q9UJU3 913 aa5.93□□□□□ -1.46
SMC4-205ENST00000465563 PROCRQ9UNN8 238 aa5.93□□□□□ -1.46
SMC4-205ENST00000465563 PRYO14603 147 aa5.92□□□□□ -1.46
SMC4-205ENST00000465563 PRPF4O43172 522 aaKnown RBP eCLIP5.92□□□□□ -1.46
SMC4-205ENST00000465563 TBXAS1P24557 533 aaPredicted RBP5.92□□□□□ -1.46
SMC4-205ENST00000465563 TMEM204Q9BSN7 226 aa5.92□□□□□ -1.46
SMC4-205ENST00000465563 TTLL2Q9BWV7 592 aa5.92□□□□□ -1.46
SMC4-205ENST00000465563 BTBD1Q9H0C5 482 aa5.92□□□□□ -1.46
SMC4-205ENST00000465563 AGO2Q9UKV8 859 aaKnown RBP5.92□□□□□ -1.46
SMC4-205ENST00000465563 PRSS44E7EML9 344 aa5.91□□□□□ -1.46
SMC4-205ENST00000465563 F8W8V4 182 aa5.91□□□□□ -1.46
SMC4-205ENST00000465563 THAP12O43422 761 aa5.91□□□□□ -1.46
SMC4-205ENST00000465563 TGFB3P10600 412 aa5.91□□□□□ -1.46
SMC4-205ENST00000465563 MATN1P21941 496 aa5.91□□□□□ -1.46
SMC4-205ENST00000465563 ATICP31939 592 aa5.91□□□□□ -1.46
SMC4-205ENST00000465563 PGGT1BP53609 377 aa5.91□□□□□ -1.46
SMC4-205ENST00000465563 INPP5JQ15735 1006 aaPredicted RBP5.91□□□□□ -1.46
SMC4-205ENST00000465563 DLK2Q6UY11 383 aa5.91□□□□□ -1.46
SMC4-205ENST00000465563 KRT28Q7Z3Y7 464 aa5.91□□□□□ -1.46
SMC4-205ENST00000465563 TMEM199Q8N511 208 aa5.91□□□□□ -1.46
SMC4-205ENST00000465563 RBMXL3Q8N7X1 1067 aaKnown RBP5.91□□□□□ -1.46
SMC4-205ENST00000465563 ASB5Q8WWX0 329 aa5.91□□□□□ -1.46
SMC4-205ENST00000465563 KAT2BQ92831 832 aa5.91□□□□□ -1.46
SMC4-205ENST00000465563 MSI2Q96DH6 328 aaKnown RBP5.91□□□□□ -1.46
SMC4-205ENST00000465563 WDR24Q96S15 920 aa5.91□□□□□ -1.46
SMC4-205ENST00000465563 UNKQ9C0B0 810 aaKnown RBP5.91□□□□□ -1.46
SMC4-205ENST00000465563 AS3MTQ9HBK9 375 aa5.91□□□□□ -1.46
SMC4-205ENST00000465563 ZBTB26Q9HCK0 441 aa5.91□□□□□ -1.46
SMC4-205ENST00000465563 EID1Q9Y6B2 187 aa5.91□□□□□ -1.46
SMC4-205ENST00000465563 ZNF335Q9H4Z2 1342 aaPredicted RBP5.91□□□□□ -1.46
SMC4-205ENST00000465563 A0A1W2PPC1 479 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 CCNT2O60583 730 aaKnown RBP5.9□□□□□ -1.46
SMC4-205ENST00000465563 CBFA2T3O75081 653 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 DRD1P21728 446 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 NDUFS1P28331 727 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 IGHMBP2P38935 993 aaKnown RBP5.9□□□□□ -1.46
SMC4-205ENST00000465563 PPATQ06203 517 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 GPS1Q13098 491 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 GAB1Q13480 694 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 BFSP2Q13515 415 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 GRM3Q14832 879 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 PTGR1Q14914 329 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 PLEKHG6Q3KR16 790 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 ZNF585BQ52M93 769 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 TRAPPC11Q7Z392 1133 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 RFX6Q8HWS3 928 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 FAM177A1Q8N128 213 aaPredicted RBP5.9□□□□□ -1.46
SMC4-205ENST00000465563 GJA10Q969M2 543 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 IQCDQ96DY2 449 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 TMOD4Q9NZQ9 345 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 IPO11Q9UI26 975 aaKnown RBP5.9□□□□□ -1.46
SMC4-205ENST00000465563 ANAPC4Q9UJX5 808 aa5.9□□□□□ -1.46
SMC4-205ENST00000465563 FRMPD2Q68DX3 1309 aaPredicted RBP5.9□□□□□ -1.47
SMC4-205ENST00000465563 EME2A4GXA9 379 aaPredicted RBP5.89□□□□□ -1.47
SMC4-205ENST00000465563 GOLGA6CA6NDK9 693 aa5.89□□□□□ -1.47
SMC4-205ENST00000465563 GOLGA6BA6NDN3 693 aa5.89□□□□□ -1.47
SMC4-205ENST00000465563 COQ9O75208 318 aa5.89□□□□□ -1.47
SMC4-205ENST00000465563 S100BP04271 92 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms