RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 INO80DQ53TQ3 878 aaPredicted RBP4.7□□□□□ -1.66
PTPN12-210ENST00000464313 GORABQ5T7V8 394 aa4.7□□□□□ -1.66
PTPN12-210ENST00000464313 KLHL17Q6TDP4 642 aa4.7□□□□□ -1.66
PTPN12-210ENST00000464313 BCDIN3DQ7Z5W3 292 aaKnown RBP4.7□□□□□ -1.66
PTPN12-210ENST00000464313 SFTPA1Q8IWL2 248 aa4.7□□□□□ -1.66
PTPN12-210ENST00000464313 SRRM1Q8IYB3 904 aaKnown RBP4.7□□□□□ -1.66
PTPN12-210ENST00000464313 CLASRPQ8N2M8 674 aaKnown RBP4.7□□□□□ -1.66
PTPN12-210ENST00000464313 PNPLA1Q8N8W4 532 aa4.7□□□□□ -1.66
PTPN12-210ENST00000464313 TERB1Q8NA31 727 aa4.7□□□□□ -1.66
PTPN12-210ENST00000464313 SCAMP5Q8TAC9 235 aa4.7□□□□□ -1.66
PTPN12-210ENST00000464313 SCARB1Q8WTV0 552 aa4.7□□□□□ -1.66
PTPN12-210ENST00000464313 EIF3CQ99613 913 aaKnown RBP4.7□□□□□ -1.66
PTPN12-210ENST00000464313 NUDT22Q9BRQ3 303 aa4.7□□□□□ -1.66
PTPN12-210ENST00000464313 RTKNQ9BST9 563 aa4.7□□□□□ -1.66
PTPN12-210ENST00000464313 KIF28PB7ZC32 967 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 SMIM22K7EJ46 135 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 M0QYT0 321 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 IPO5O00410 1097 aaKnown RBP4.69□□□□□ -1.66
PTPN12-210ENST00000464313 CTIFO43310 598 aaKnown RBP4.69□□□□□ -1.66
PTPN12-210ENST00000464313 PPP6R2O75170 966 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 ACTL6BO94805 426 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 NHLRC4P0CG21 123 aaPredicted RBP4.69□□□□□ -1.66
PTPN12-210ENST00000464313 WT1P19544 449 aaPredicted RBP4.69□□□□□ -1.66
PTPN12-210ENST00000464313 GALNSP34059 522 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 DGKQP52824 942 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 GPC5P78333 572 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 CCDC15Q0P6D6 951 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 SEMA3BQ13214 749 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 DNASE1L3Q13609 305 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 AWAT1Q58HT5 328 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 C16orf89Q6UX73 402 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 LDHAL6AQ6ZMR3 332 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 TRIM72Q6ZMU5 477 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 KRT27Q7Z3Y8 459 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 SUGP1Q8IWZ8 645 aaKnown RBP4.69□□□□□ -1.66
PTPN12-210ENST00000464313 SMC5Q8IY18 1101 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 NRSN1Q8IZ57 195 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 MAFAQ8NHW3 353 aaPredicted RBP4.69□□□□□ -1.66
PTPN12-210ENST00000464313 SMG7Q92540 1137 aaKnown RBP4.69□□□□□ -1.66
PTPN12-210ENST00000464313 SARAFQ96BY9 339 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 EID2BQ96D98 161 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 DAZAP1Q96EP5 407 aaKnown RBP4.69□□□□□ -1.66
PTPN12-210ENST00000464313 EDC3Q96F86 508 aaKnown RBP4.69□□□□□ -1.66
PTPN12-210ENST00000464313 HERPUD2Q9BSE4 406 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 MECRQ9BV79 373 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 TMEM120AQ9BXJ8 343 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 SLC29A3Q9BZD2 475 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 MYLK2Q9H1R3 596 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 MYH16Q9H6N6 1097 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 AGO4Q9HCK5 861 aaKnown RBP4.69□□□□□ -1.66
PTPN12-210ENST00000464313 SEMA4GQ9NTN9 838 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 ARPP21Q9UBL0 812 aaPredicted RBP4.69□□□□□ -1.66
PTPN12-210ENST00000464313 HERC5Q9UII4 1024 aaKnown RBP4.69□□□□□ -1.66
PTPN12-210ENST00000464313 WNT6Q9Y6F9 365 aa4.69□□□□□ -1.66
PTPN12-210ENST00000464313 CCDC187A0A096LP49 1063 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 FAM90A18PA6NE21 464 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 PLEKHD1A6NEE1 506 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 FAM90A16PA6NEW6 464 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 LRRC3CA6NJW4 275 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 FAM90A9PA6NNJ1 464 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 FAM90A5PA8MXJ8 464 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 TARM1B6A8C7 271 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 FYB1O15117 783 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 FAM90A15PP0C7V4 464 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 FAM90A14PP0C7W9 464 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 TMIGD3P0DMS9 266 aaPredicted RBP4.68□□□□□ -1.66
PTPN12-210ENST00000464313 PRKAA2P54646 552 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 AP2B1P63010 937 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 PRKG1Q13976 671 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 TAF5Q15542 800 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 TMEM119Q4V9L6 283 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 DENND2CQ68D51 928 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 TANGO2Q6ICL3 276 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 MTHFD1LQ6UB35 978 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 TTC30AQ86WT1 665 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 LINC01465Q8N7H1 131 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 C12orf76Q8N812 135 aaPredicted RBP4.68□□□□□ -1.66
PTPN12-210ENST00000464313 FAM71DQ8N9W8 422 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 TRAPPC12Q8WVT3 735 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 SNX18Q96RF0 628 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 PABPC3Q9H361 631 aaKnown RBP4.68□□□□□ -1.66
PTPN12-210ENST00000464313 PRDM8Q9NQV8 689 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 SRP68Q9UHB9 627 aaKnown RBP4.68□□□□□ -1.66
PTPN12-210ENST00000464313 DAPP1Q9UN19 280 aa4.68□□□□□ -1.66
PTPN12-210ENST00000464313 LOC102724159A0A0B4J2E5 919 aa4.67□□□□□ -1.66
PTPN12-210ENST00000464313 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.67□□□□□ -1.66
PTPN12-210ENST00000464313 GXYLT2A0PJZ3 443 aa4.67□□□□□ -1.66
PTPN12-210ENST00000464313 HMX3A6NHT5 357 aa4.67□□□□□ -1.66
PTPN12-210ENST00000464313 JTBO76095 146 aa4.67□□□□□ -1.66
PTPN12-210ENST00000464313 THBS4P35443 961 aa4.67□□□□□ -1.66
PTPN12-210ENST00000464313 IGHMBP2P38935 993 aaKnown RBP4.67□□□□□ -1.66
PTPN12-210ENST00000464313 PROK1P58294 105 aa4.67□□□□□ -1.66
PTPN12-210ENST00000464313 FAM3BP58499 235 aaPredicted RBP4.67□□□□□ -1.66
PTPN12-210ENST00000464313 HOXA4Q00056 320 aaPredicted RBP4.67□□□□□ -1.66
PTPN12-210ENST00000464313 FOXO1Q12778 655 aa4.67□□□□□ -1.66
PTPN12-210ENST00000464313 SF3A3Q12874 501 aaKnown RBP eCLIP4.67□□□□□ -1.66
PTPN12-210ENST00000464313 MFSD13AQ14CX5 517 aa4.67□□□□□ -1.66
PTPN12-210ENST00000464313 PWP2Q15269 919 aaKnown RBP4.67□□□□□ -1.66
PTPN12-210ENST00000464313 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
PTPN12-210ENST00000464313 ANKRD40Q6AI12 368 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms