RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 DUSP16Q9BY84 665 aa16.33■□□□□ 0.2
SDF4-204ENST00000459994 PDCL3Q9H2J4 239 aa16.33■□□□□ 0.2
SDF4-204ENST00000459994 NUDT5Q9UKK9 219 aa16.33■□□□□ 0.2
SDF4-204ENST00000459994 TNRC6BQ9UPQ9 1833 aaKnown RBP16.33■□□□□ 0.2
SDF4-204ENST00000459994 ABCA7Q8IZY2 2146 aa16.33■□□□□ 0.2
SDF4-204ENST00000459994 DDX3XO00571 662 aaKnown RBP eCLIP16.32■□□□□ 0.26e-16■■■■■ 35.6
SDF4-204ENST00000459994 GREM1O60565 184 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 NFATC1O95644 943 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 FAM200BP0CF97 657 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 GZMAP12544 262 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 GPD2P43304 727 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 BCAT1P54687 386 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 SPEM2Q0P670 501 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 HECTD3Q5T447 861 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 PPP1R2P3Q6NXS1 205 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 DENND1BQ6P3S1 775 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 TTC30AQ86WT1 665 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 BBS7Q8IWZ6 715 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 TMEM35BQ8NCS4 154 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 PDZD8Q8NEN9 1154 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 PCDHB18PQ96TA0 734 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 UBXN6Q9BZV1 441 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 DEF6Q9H4E7 631 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 ZDHHC4Q9NPG8 344 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 ADAMTS1Q9UHI8 967 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 CEP83Q9Y592 693 aa16.32■□□□□ 0.2
SDF4-204ENST00000459994 CEP250Q9BV73 2442 aa16.31■□□□□ 0.2
SDF4-204ENST00000459994 M0QYV0 167 aa16.31■□□□□ 0.2
SDF4-204ENST00000459994 AKR1B10O60218 316 aa16.31■□□□□ 0.2
SDF4-204ENST00000459994 HNRNPLP14866 589 aaKnown RBP eCLIP16.31■□□□□ 0.2
SDF4-204ENST00000459994 CYLC1P35663 651 aaPredicted RBP16.31■□□□□ 0.2
SDF4-204ENST00000459994 SLC8A3P57103 927 aa16.31■□□□□ 0.2
SDF4-204ENST00000459994 NOMO3P69849 1222 aa16.31■□□□□ 0.2
SDF4-204ENST00000459994 CCZ1BP86790 482 aa16.31■□□□□ 0.2
SDF4-204ENST00000459994 CCZ1P86791 482 aaPredicted RBP16.31■□□□□ 0.2
SDF4-204ENST00000459994 BST2Q10589 180 aaKnown RBP16.31■□□□□ 0.2
SDF4-204ENST00000459994 SLC18A3Q16572 532 aa16.31■□□□□ 0.2
SDF4-204ENST00000459994 CLEC16AQ2KHT3 1053 aa16.31■□□□□ 0.2
SDF4-204ENST00000459994 LY6G5CQ5SRR4 150 aa16.31■□□□□ 0.2
SDF4-204ENST00000459994 SCD5Q86SK9 330 aa16.31■□□□□ 0.2
SDF4-204ENST00000459994 WDTC1Q8N5D0 677 aa16.31■□□□□ 0.2
SDF4-204ENST00000459994 FAM160A2Q8N612 972 aaPredicted RBP16.31■□□□□ 0.2
SDF4-204ENST00000459994 STK32AQ8WU08 396 aa16.31■□□□□ 0.2
SDF4-204ENST00000459994 SLC35F5Q8WV83 523 aa16.31■□□□□ 0.2
SDF4-204ENST00000459994 P2RY11Q96G91 374 aa16.31■□□□□ 0.2
SDF4-204ENST00000459994 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.31■□□□□ 0.2
SDF4-204ENST00000459994 NENFQ9UMX5 172 aa16.31■□□□□ 0.2
SDF4-204ENST00000459994 EPN1Q9Y6I3 576 aaPredicted RBP16.31■□□□□ 0.2
SDF4-204ENST00000459994 PLXND1Q9Y4D7 1925 aa16.31■□□□□ 0.2
SDF4-204ENST00000459994 A0A087X0T9 212 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 A0A1W2PQH9 124 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 SOWAHDA6NJG2 315 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 TRIM24O15164 1050 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 ARHGAP6O43182 974 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 TLR5O60602 858 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 LCA5LO95447 670 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 FAM228BP0C875 321 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 UNGP13051 313 aaPredicted RBP16.3■□□□□ 0.2
SDF4-204ENST00000459994 HOXA6P31267 233 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 KIF11P52732 1056 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 AMPD2Q01433 879 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 KDSRQ06136 332 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 PDE4CQ08493 712 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 NR1H3Q13133 447 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 DMC1Q14565 340 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 RSPO4Q2I0M5 234 aaPredicted RBP16.3■□□□□ 0.2
SDF4-204ENST00000459994 C2orf27AQ580R0 203 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 EMC10Q5UCC4 262 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 LAIR1Q6GTX8 287 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 RAD9BQ6WBX8 426 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 PHTF2Q8N3S3 785 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 UBA3Q8TBC4 463 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 USP33Q8TEY7 942 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 SECISBP2LQ93073 1101 aaKnown RBP16.3■□□□□ 0.2
SDF4-204ENST00000459994 KLF16Q9BXK1 252 aaPredicted RBP16.3■□□□□ 0.2
SDF4-204ENST00000459994 PNPLA8Q9NP80 782 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 CYLDQ9NQC7 956 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 SEPT11Q9NVA2 429 aaKnown RBP16.3■□□□□ 0.2
SDF4-204ENST00000459994 COMMD8Q9NX08 183 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 NAGPAQ9UK23 515 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 SLC8A2Q9UPR5 921 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 SCML2Q9UQR0 700 aa16.3■□□□□ 0.2
SDF4-204ENST00000459994 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.3■□□□□ 0.2
SDF4-204ENST00000459994 E2F8A0AVK6 867 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 EIF3CLB5ME19 914 aaKnown RBP16.29■□□□□ 0.2
SDF4-204ENST00000459994 TULP2O00295 520 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 XPO1O14980 1071 aaKnown RBP16.29■□□□□ 0.2
SDF4-204ENST00000459994 DCLK1O15075 740 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 ADH5P11766 374 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 PLA2G4AP47712 749 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 RPL34P49207 117 aaKnown RBP16.29■□□□□ 0.2
SDF4-204ENST00000459994 TUBP50607 506 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 CENPCQ03188 943 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 CCDC6Q16204 474 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 ACAD10Q6JQN1 1059 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 ALKBH5Q6P6C2 394 aaKnown RBP16.29■□□□□ 0.2
SDF4-204ENST00000459994 KBTBD6Q86V97 674 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 TMEM25Q86YD3 366 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 PASD1Q8IV76 773 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 CCDC33Q8N5R6 958 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms