RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 GPAMQ9HCL2 828 aa12.68□□□□□ -0.38
NEDD4L-208ENST00000456173 BARX2Q9UMQ3 279 aaPredicted RBP12.68□□□□□ -0.38
NEDD4L-208ENST00000456173 SORCS3Q9UPU3 1222 aa12.68□□□□□ -0.38
NEDD4L-208ENST00000456173 TMED5Q9Y3A6 229 aa12.68□□□□□ -0.38
NEDD4L-208ENST00000456173 C5orf60A6NFR6 353 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 ATP5BP06576 529 aaKnown RBP12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 PBX1P40424 430 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 TNFAIP2Q03169 654 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 NFIL3Q16649 462 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 EML3Q32P44 896 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 ATP6AP1LQ52LC2 224 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 ZDHHC13Q8IUH4 622 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 AMER2Q8N7J2 671 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 HELQQ8TDG4 1101 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 UTP15Q8TED0 518 aaKnown RBP12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 FAR2Q96K12 515 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 B3GALT6Q96L58 329 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 MECRQ9BV79 373 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 TMEM8AQ9HCN3 771 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 FAM49BQ9NUQ9 324 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 NDFIP2Q9NV92 336 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 RIC8BQ9NVN3 520 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 ZNF224Q9NZL3 707 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 SLC17A7Q9P2U7 560 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 STAP1Q9ULZ2 295 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 LRRIQ1Q96JM4 1722 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 SDR42E2A6NKP2 422 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 CCND2P30279 289 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 HLFQ16534 295 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 ZNF568Q3ZCX4 644 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 TRABD2AQ86V40 505 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 PLEKHA8Q96JA3 519 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 NCKIPSDQ9NZQ3 722 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 PCYOX1Q9UHG3 505 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 ABCC3O15438 1527 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 SERPINA6P08185 405 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 CCT8P50990 548 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 NEK3P51956 506 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 DRG2P55039 364 aaKnown RBP12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 COL9A3Q14050 684 aaPredicted RBP12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 DLGAP5Q15398 846 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 DDR2Q16832 855 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 AKIRIN2Q53H80 203 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 SCARA3Q6AZY7 606 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 TTC30AQ86WT1 665 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 KRT73Q86Y46 540 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 BEST2Q8NFU1 509 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 RNF139Q8WU17 664 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 CXorf21Q9HAI6 301 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 PIH1D1Q9NWS0 290 aaKnown RBP12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 PNPLA6Q8IY17 1366 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 SNTNA6NMZ2 147 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 KLHL18O94889 574 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 CREB1P16220 341 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 PHC1P78364 1004 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 COX10Q12887 443 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 PRKAA1Q13131 559 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 DUOXA2Q1HG44 320 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 NADK2Q4G0N4 442 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 TUBA3EQ6PEY2 450 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 EEPD1Q7L9B9 569 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 UBE2Q1Q7Z7E8 422 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 DMRTB1Q96MA1 342 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 TSEN34Q9BSV6 310 aaKnown RBP12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 RNF38Q9H0F5 515 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 FAM8A1Q9UBU6 413 aa12.67□□□□□ -0.38
NEDD4L-208ENST00000456173 EFCAB6Q5THR3 1501 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 PSMD12O00232 456 aaPredicted RBP12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 TROAPQ12815 778 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 SH3D19Q5HYK7 790 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 MIIPQ5JXC2 388 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 SDE2Q6IQ49 451 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 RSPH1Q8WYR4 309 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 SIPA1Q96FS4 1042 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 CIB1Q99828 191 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 POLR3FQ9H1D9 316 aaPredicted RBP12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 SLC8A2Q9UPR5 921 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 ERBB3P21860 1342 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 SALL1Q9NSC2 1324 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 PLCL1Q15111 1095 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 TLCD1Q96CP7 247 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 C12orf4Q9NQ89 552 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 CCDC59Q9P031 241 aaKnown RBP12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 EIF3DO15371 548 aaKnown RBP eCLIP12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 BNIP3LO60238 219 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 MYO1DO94832 1006 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 PPATQ06203 517 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 ERFEQ4G0M1 354 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 RCN3Q96D15 328 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 C12orf65Q9H3J6 166 aaKnown RBP12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 MRPL39Q9NYK5 338 aaKnown RBP12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 TAS2R14Q9NYV8 317 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 CD274Q9NZQ7 290 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 GJB6O95452 261 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 CNTFP26441 200 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 JAK3P52333 1124 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 TAB1Q15750 504 aa12.66□□□□□ -0.38
NEDD4L-208ENST00000456173 SLC1A5Q15758 541 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms