RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 PYCARDQ9ULZ3 195 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 PEX16Q9Y5Y5 336 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 ANKRD36A6QL64 1941 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 LDLRP01130 860 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 HUNKP57058 714 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 POU4F1Q01851 419 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 ST3GAL1Q11201 340 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 KRT33BQ14525 404 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 NAIF1Q69YI7 327 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-204ENST00000455883 POLNQ7Z5Q5 900 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 TBCKQ8TEA7 893 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 IL17RAQ96F46 866 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 TUBA1CQ9BQE3 449 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 TSEN34Q9BSV6 310 aaKnown RBP5.35□□□□□ -1.55
CSMD3-204ENST00000455883 THTPAQ9BU02 230 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 ANO3Q9BYT9 981 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 CLK4Q9HAZ1 481 aaKnown RBP5.35□□□□□ -1.55
CSMD3-204ENST00000455883 L1RE1Q9UN81 338 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 NAV1Q8NEY1 1877 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 MYL12BO14950 172 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 PRMT3O60678 531 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 RBP5P82980 135 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 ELAVL2Q12926 359 aaKnown RBP5.35□□□□□ -1.55
CSMD3-204ENST00000455883 PICALMQ13492 652 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 SMCO1Q147U7 214 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 ARHGAP17Q68EM7 881 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 MCUQ8NE86 351 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 BTF3L4Q96K17 158 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 KCTD15Q96SI1 283 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-204ENST00000455883 FUT8Q9BYC5 575 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 JPH1Q9HDC5 661 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-204ENST00000455883 TBC1D13Q9NVG8 400 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 NR2E1Q9Y466 385 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 TESPA1A2RU30 521 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 ZSCAN5CA6NGD5 496 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 ALDH1A2O94788 518 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 UNC5CO95185 931 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 RORAP35398 523 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 EIF2B2P49770 351 aaKnown RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 STX4Q12846 297 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 CRY1Q16526 586 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 CYP51A1Q16850 503 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 TMEM270Q6UE05 265 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 AKAP14Q86UN6 197 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PPM1NQ8N819 430 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PROX1Q92786 737 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 APOPT1Q96IL0 206 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 SLC38A2Q96QD8 506 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 TEFMQ96QE5 360 aaKnown RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 MMTAG2Q9BU76 263 aaKnown RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 UNKLQ9H9P5 680 aaKnown RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 TAS2R1Q9NYW7 299 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 CRYL1Q9Y2S2 319 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 ATRNO75882 1429 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 C21orf2O43822 256 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 MFN2O95140 757 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 IFNA7P01567 189 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 CYP21A2P08686 494 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 HSD17B3P37058 310 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 CASP4P49662 377 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 ACVR2BQ13705 512 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 EFR3AQ14156 821 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PTPN21Q16825 1174 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PLD6Q8N2A8 252 aaKnown RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 HM13Q8TCT9 377 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PARD3BQ8TEW8 1205 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 COA1Q9GZY4 146 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 CKLFQ9UBR5 152 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 NDUFAF1Q9Y375 327 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 ALDH1A1P00352 501 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 IREB2P48200 963 aaKnown RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 DRAP1Q14919 205 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PAGE2BQ5JRK9 111 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PRR5LQ6MZQ0 368 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 DYMQ7RTS9 669 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 ANKMY2Q8IV38 441 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 COLGALT2Q8IYK4 626 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 CD101Q93033 1021 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 CPNE1Q99829 537 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 C1QTNF7Q9BXJ2 289 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 EVA1BQ9NVM1 165 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 ADPRHL2Q9NX46 363 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 IFT80Q9P2H3 777 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PSME2Q9UL46 239 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 ADGRB1O14514 1584 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PLXNB1O43157 2135 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 HOXA2O43364 376 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 DNAJC6O75061 913 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PLD1Q13393 1074 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 ATP13A5Q4VNC0 1218 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 DENND1BQ6P3S1 775 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 APOBEC3FQ8IUX4 373 aaKnown RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PSTKQ8IV42 348 aaKnown RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 CKAP2Q8WWK9 683 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 RIN2Q8WYP3 895 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-204ENST00000455883 OMA1Q96E52 524 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 PPP1R16BQ96T49 567 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 EYA1Q99502 592 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 EGFL8Q99944 293 aa5.34□□□□□ -1.55
CSMD3-204ENST00000455883 RMI1Q9H9A7 625 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms