RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 VDRP11473 427 aa22.66■■□□□ 1.22
C9orf3-208ENST00000451893 PRKCSHP14314 528 aaPredicted RBP22.66■■□□□ 1.22
C9orf3-208ENST00000451893 CORO1AP31146 461 aaKnown RBP22.66■■□□□ 1.22
C9orf3-208ENST00000451893 WASP42768 502 aa22.66■■□□□ 1.22
C9orf3-208ENST00000451893 KCNJ12Q14500 433 aa22.66■■□□□ 1.22
C9orf3-208ENST00000451893 TMEM270Q6UE05 265 aa22.66■■□□□ 1.22
C9orf3-208ENST00000451893 SMOC1Q9H4F8 434 aa22.66■■□□□ 1.22
C9orf3-208ENST00000451893 OLA1Q9NTK5 396 aaKnown RBP22.66■■□□□ 1.22
C9orf3-208ENST00000451893 PLK2Q9NYY3 685 aa22.66■■□□□ 1.22
C9orf3-208ENST00000451893 NUP205Q92621 2012 aa22.65■■□□□ 1.22
C9orf3-208ENST00000451893 A0A0A0MRY4 1105 aa22.65■■□□□ 1.22
C9orf3-208ENST00000451893 CACNG3O60359 315 aa22.65■■□□□ 1.22
C9orf3-208ENST00000451893 NTSR1P30989 418 aa22.65■■□□□ 1.22
C9orf3-208ENST00000451893 MCCD1P59942 119 aaPredicted RBP22.65■■□□□ 1.22
C9orf3-208ENST00000451893 PDE4CQ08493 712 aa22.65■■□□□ 1.22
C9orf3-208ENST00000451893 ADIGQ0VDE8 80 aa22.65■■□□□ 1.22
C9orf3-208ENST00000451893 NR1I3Q14994 352 aa22.65■■□□□ 1.22
C9orf3-208ENST00000451893 LPCAT2Q7L5N7 544 aa22.65■■□□□ 1.22
C9orf3-208ENST00000451893 IRF2BP1Q8IU81 584 aa22.65■■□□□ 1.22
C9orf3-208ENST00000451893 CREBRFQ8IUR6 639 aa22.65■■□□□ 1.22
C9orf3-208ENST00000451893 UBA3Q8TBC4 463 aa22.65■■□□□ 1.22
C9orf3-208ENST00000451893 GOLGA1Q92805 767 aa22.65■■□□□ 1.22
C9orf3-208ENST00000451893 ULBP1Q9BZM6 244 aa22.65■■□□□ 1.22
C9orf3-208ENST00000451893 MARK1Q9P0L2 795 aa22.65■■□□□ 1.22
C9orf3-208ENST00000451893 KIAA1257Q9ULG3 409 aa22.65■■□□□ 1.22
C9orf3-208ENST00000451893 ABCA7Q8IZY2 2146 aa22.64■■□□□ 1.22
C9orf3-208ENST00000451893 SETSIPP0DME0 302 aa22.64■■□□□ 1.21
C9orf3-208ENST00000451893 PPM1JQ5JR12 505 aa22.64■■□□□ 1.21
C9orf3-208ENST00000451893 PMS2CLQ68D20 193 aa22.64■■□□□ 1.21
C9orf3-208ENST00000451893 RNF43Q68DV7 783 aa22.64■■□□□ 1.21
C9orf3-208ENST00000451893 APTXQ7Z2E3 356 aaKnown RBP22.64■■□□□ 1.21
C9orf3-208ENST00000451893 DENND1CQ8IV53 801 aa22.64■■□□□ 1.21
C9orf3-208ENST00000451893 PHTF2Q8N3S3 785 aa22.64■■□□□ 1.21
C9orf3-208ENST00000451893 ZNF276Q8N554 614 aa22.64■■□□□ 1.21
C9orf3-208ENST00000451893 RLN3Q8WXF3 142 aa22.64■■□□□ 1.21
C9orf3-208ENST00000451893 TRIM24O15164 1050 aa22.63■■□□□ 1.21
C9orf3-208ENST00000451893 LCP1P13796 627 aa22.63■■□□□ 1.21
C9orf3-208ENST00000451893 HARS2P49590 506 aaKnown RBP22.63■■□□□ 1.21
C9orf3-208ENST00000451893 KRT31Q15323 416 aa22.63■■□□□ 1.21
C9orf3-208ENST00000451893 RAB41Q5JT25 222 aa22.63■■□□□ 1.21
C9orf3-208ENST00000451893 UCMAQ8WVF2 138 aa22.63■■□□□ 1.21
C9orf3-208ENST00000451893 PLD4Q96BZ4 506 aa22.63■■□□□ 1.21
C9orf3-208ENST00000451893 NAP1L5Q96NT1 182 aaPredicted RBP22.63■■□□□ 1.21
C9orf3-208ENST00000451893 EDEM2Q9BV94 578 aa22.63■■□□□ 1.21
C9orf3-208ENST00000451893 RTN4Q9NQC3 1192 aaKnown RBP22.63■■□□□ 1.21
C9orf3-208ENST00000451893 DCHS1Q96JQ0 3298 aa22.63■■□□□ 1.21
C9orf3-208ENST00000451893 BCLAF3A2AJT9 711 aaKnown RBP22.62■■□□□ 1.21
C9orf3-208ENST00000451893 M0QYV0 167 aa22.62■■□□□ 1.21
C9orf3-208ENST00000451893 KHNYNO15037 678 aaKnown RBP22.62■■□□□ 1.21
C9orf3-208ENST00000451893 P4HA2O15460 535 aa22.62■■□□□ 1.21
C9orf3-208ENST00000451893 GREM1O60565 184 aa22.62■■□□□ 1.21
C9orf3-208ENST00000451893 ADAM23O75077 832 aa22.62■■□□□ 1.21
C9orf3-208ENST00000451893 PAEPP09466 180 aa22.62■■□□□ 1.21
C9orf3-208ENST00000451893 BCKDHBP21953 392 aa22.62■■□□□ 1.21
C9orf3-208ENST00000451893 COPB1P53618 953 aaKnown RBP22.62■■□□□ 1.21
C9orf3-208ENST00000451893 GSDMDP57764 484 aa22.62■■□□□ 1.21
C9orf3-208ENST00000451893 ARID5AQ03989 594 aa22.62■■□□□ 1.21
C9orf3-208ENST00000451893 EGFLAMQ63HQ2 1017 aa22.62■■□□□ 1.21
C9orf3-208ENST00000451893 Q6ZNB5 142 aa22.62■■□□□ 1.21
C9orf3-208ENST00000451893 ARMCX6Q7L4S7 300 aa22.62■■□□□ 1.21
C9orf3-208ENST00000451893 DDI1Q8WTU0 396 aa22.62■■□□□ 1.21
C9orf3-208ENST00000451893 PIGKQ92643 395 aa22.62■■□□□ 1.21
C9orf3-208ENST00000451893 ERLEC1Q96DZ1 483 aa22.62■■□□□ 1.21
C9orf3-208ENST00000451893 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.62■■□□□ 1.21
C9orf3-208ENST00000451893 HNRNPLP14866 589 aaKnown RBP eCLIP22.61■■□□□ 1.21
C9orf3-208ENST00000451893 MARSP56192 900 aaKnown RBP22.61■■□□□ 1.21
C9orf3-208ENST00000451893 STARD3Q14849 445 aa22.61■■□□□ 1.21
C9orf3-208ENST00000451893 E2F5Q15329 346 aa22.61■■□□□ 1.21
C9orf3-208ENST00000451893 STILQ15468 1287 aa22.61■■□□□ 1.21
C9orf3-208ENST00000451893 PLA2G2CQ5R387 149 aa22.61■■□□□ 1.21
C9orf3-208ENST00000451893 STPG1Q5TH74 334 aa22.61■■□□□ 1.21
C9orf3-208ENST00000451893 TCEAL6Q6IPX3 200 aa22.61■■□□□ 1.21
C9orf3-208ENST00000451893 TOGARAM2Q6ZUX3 1019 aa22.61■■□□□ 1.21
C9orf3-208ENST00000451893 FMNL3Q8IVF7 1028 aa22.61■■□□□ 1.21
C9orf3-208ENST00000451893 VSTM4Q8IW00 320 aa22.61■■□□□ 1.21
C9orf3-208ENST00000451893 TCEAL3Q969E4 200 aa22.61■■□□□ 1.21
C9orf3-208ENST00000451893 STARD13Q9Y3M8 1113 aa22.61■■□□□ 1.21
C9orf3-208ENST00000451893 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.6■■□□□ 1.21
C9orf3-208ENST00000451893 TULP2O00295 520 aa22.6■■□□□ 1.21
C9orf3-208ENST00000451893 AFPP02771 609 aaKnown RBP22.6■■□□□ 1.21
C9orf3-208ENST00000451893 KRT5P13647 590 aa22.6■■□□□ 1.21
C9orf3-208ENST00000451893 P2RY2P41231 377 aa22.6■■□□□ 1.21
C9orf3-208ENST00000451893 RGS7P49802 495 aa22.6■■□□□ 1.21
C9orf3-208ENST00000451893 LIMK1P53667 647 aa22.6■■□□□ 1.21
C9orf3-208ENST00000451893 KCNH2Q12809 1159 aa22.6■■□□□ 1.21
C9orf3-208ENST00000451893 HSP90AA4PQ58FG1 418 aa22.6■■□□□ 1.21
C9orf3-208ENST00000451893 RRAGAQ7L523 313 aa22.6■■□□□ 1.21
C9orf3-208ENST00000451893 TMEFF1Q8IYR6 380 aa22.6■■□□□ 1.21
C9orf3-208ENST00000451893 RBBP8NLQ8NC74 664 aaPredicted RBP22.6■■□□□ 1.21
C9orf3-208ENST00000451893 NDRG1Q92597 394 aaKnown RBP22.6■■□□□ 1.21
C9orf3-208ENST00000451893 EDEM1Q92611 657 aa22.6■■□□□ 1.21
C9orf3-208ENST00000451893 TUBGCP2Q9BSJ2 902 aa22.6■■□□□ 1.21
C9orf3-208ENST00000451893 CNGB3Q9NQW8 809 aa22.6■■□□□ 1.21
C9orf3-208ENST00000451893 ABCC13Q9NSE7 274 aa22.6■■□□□ 1.21
C9orf3-208ENST00000451893 AGO1Q9UL18 857 aaKnown RBP22.6■■□□□ 1.21
C9orf3-208ENST00000451893 O00370 1275 aa22.59■■□□□ 1.21
C9orf3-208ENST00000451893 BRD2P25440 801 aaKnown RBP22.59■■□□□ 1.21
C9orf3-208ENST00000451893 DPP6P42658 865 aa22.59■■□□□ 1.21
C9orf3-208ENST00000451893 MTIF2P46199 727 aaKnown RBP22.59■■□□□ 1.21
C9orf3-208ENST00000451893 RPL6Q02878 288 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms