RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 TNFRSF8P28908 595 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 RBMS1P29558 406 aaKnown RBP8.39□□□□□ -1.07
LINC01961-201ENST00000449954 GUCY2FP51841 1108 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 BCAT1P54687 386 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 RACK1P63244 317 aaKnown RBP8.39□□□□□ -1.07
LINC01961-201ENST00000449954 SRSF11Q05519 484 aaKnown RBP8.39□□□□□ -1.07
LINC01961-201ENST00000449954 MCL1Q07820 350 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 ANO4Q32M45 955 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 ZSCAN23Q3MJ62 389 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 KCNT1Q5JUK3 1230 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 SFMBT2Q5VUG0 894 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 C9orf57Q5W0N0 161 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 WSCD1Q658N2 575 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 USP53Q70EK8 1073 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 KANSL1Q7Z3B3 1105 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 TMPRSS6Q8IU80 811 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 TMEM130Q8N3G9 435 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 OXR1Q8N573 874 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 HPS3Q969F9 1004 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 SGF29Q96ES7 293 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 FUBP3Q96I24 572 aaKnown RBP eCLIP8.39□□□□□ -1.07
LINC01961-201ENST00000449954 XPO6Q96QU8 1125 aaKnown RBP8.39□□□□□ -1.07
LINC01961-201ENST00000449954 PYM1Q9BRP8 204 aaKnown RBP8.39□□□□□ -1.07
LINC01961-201ENST00000449954 TMLHEQ9NVH6 421 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 SERTAD1Q9UHV2 236 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 STON1Q9Y6Q2 735 aa8.39□□□□□ -1.07
LINC01961-201ENST00000449954 A0A087WWV3 80 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 A0A1B0GTH6 734 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 CCDC169A6NNP5 214 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 PRRT4C9JH25 899 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 PIRO00625 290 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 CLDN3O15551 220 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 DEXIO95424 95 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 OAS1P00973 400 aaKnown RBP8.38□□□□□ -1.07
LINC01961-201ENST00000449954 SPATA31C1P0DKV0 1188 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 CASRP41180 1078 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 MAGEA11P43364 429 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 NPTX2P47972 431 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 TAF6P49848 677 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 STRN3Q13033 797 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 CALCRLQ16602 461 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 SEZ6Q53EL9 994 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 CDCP2Q5VXM1 449 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 ZPBP2Q6X784 338 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 CATSPER3Q86XQ3 398 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 CD302Q8IX05 232 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 NSUN7Q8NE18 718 aaKnown RBP8.38□□□□□ -1.07
LINC01961-201ENST00000449954 ZNF564Q8TBZ8 553 aaPredicted RBP8.38□□□□□ -1.07
LINC01961-201ENST00000449954 BIRC7Q96CA5 298 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 GRAMD1AQ96CP6 724 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 SPATA17Q96L03 361 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 RWDD1Q9H446 243 aaPredicted RBP8.38□□□□□ -1.07
LINC01961-201ENST00000449954 C6orf106Q9H6K1 298 aaPredicted RBP8.38□□□□□ -1.07
LINC01961-201ENST00000449954 GDF3Q9NR23 364 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 GEMIN8Q9NWZ8 242 aaKnown RBP8.38□□□□□ -1.07
LINC01961-201ENST00000449954 PCDHGA8Q9Y5G5 932 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 CACNA1DQ01668 2161 aa8.38□□□□□ -1.07
LINC01961-201ENST00000449954 ZNF840PA6NDX5 716 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 POM121CA8CG34 1229 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 TRIM24O15164 1050 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 LZTS3O60299 673 aaPredicted RBP8.37□□□□□ -1.07
LINC01961-201ENST00000449954 TSPAN3O60637 253 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 CSO75390 466 aaKnown RBP8.37□□□□□ -1.07
LINC01961-201ENST00000449954 GJB6O95452 261 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 SEMA4FO95754 770 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 MSX1P28360 303 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 COPAP53621 1224 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 PEX3P56589 373 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 ENPP2Q13822 863 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 KRT32Q14532 448 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 PDIA5Q14554 519 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 SHBQ15464 509 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 LYPD4Q6UWN0 246 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 PIK3AP1Q6ZUJ8 805 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 SPATA2LQ8IUW3 424 aaPredicted RBP8.37□□□□□ -1.07
LINC01961-201ENST00000449954 SCN4BQ8IWT1 228 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 ZBTB45Q96K62 511 aaPredicted RBP8.37□□□□□ -1.07
LINC01961-201ENST00000449954 SLC46A1Q96NT5 459 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 ACBD6Q9BR61 282 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 TTLL2Q9BWV7 592 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 BTBD1Q9H0C5 482 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 RNF38Q9H0F5 515 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 ADNPQ9H2P0 1102 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 C17orf75Q9HAS0 396 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 KMT5AQ9NQR1 393 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 ANAPC2Q9UJX6 822 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 DERAQ9Y315 318 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 SH3BP1Q9Y3L3 701 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 DNHD1Q96M86 4753 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 ADGRG4Q8IZF6 3080 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 CELSR1Q9NYQ6 3014 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 TCHHQ07283 1943 aa8.37□□□□□ -1.07
LINC01961-201ENST00000449954 F8P00451 2351 aa8.36□□□□□ -1.07
LINC01961-201ENST00000449954 CKAP5Q14008 2032 aa8.36□□□□□ -1.07
LINC01961-201ENST00000449954 CDRT15L2A8MXV6 281 aa8.36□□□□□ -1.07
LINC01961-201ENST00000449954 LACTBL1A8MY62 500 aa8.36□□□□□ -1.07
LINC01961-201ENST00000449954 WASH3PC4AMC7 463 aa8.36□□□□□ -1.07
LINC01961-201ENST00000449954 NEDD8-MDP1E9PL57 170 aa8.36□□□□□ -1.07
LINC01961-201ENST00000449954 FSBPO95073 299 aa8.36□□□□□ -1.07
LINC01961-201ENST00000449954 ADRB2P07550 413 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms