RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 PLLPQ9Y342 182 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 NR2E3Q9Y5X4 410 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 SNED1Q8TER0 1413 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 AGRPO00253 132 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 HOXA2O43364 376 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 KCNH1O95259 989 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 ZBTB7AO95365 584 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 COX4I1P13073 169 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 CKMT2P17540 419 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 CD247P20963 164 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 GNA15P30679 374 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 ESRRGP62508 458 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 NR1D2Q14995 579 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 MAPK11Q15759 364 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 FXNQ16595 210 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 MTX3Q5HYI7 312 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 PPM1JQ5JR12 505 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 N4BP2L1Q5TBK1 243 aaPredicted RBP7.76□□□□□ -1.17
HDAC9-214ENST00000441542 METTL21CQ5VZV1 264 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 INTS5Q6P9B9 1019 aaKnown RBP7.76□□□□□ -1.17
HDAC9-214ENST00000441542 KYAT3Q6YP21 454 aaKnown RBP7.76□□□□□ -1.17
HDAC9-214ENST00000441542 Q6ZNX1 250 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 DAW1Q8N136 415 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 MARVELD2Q8N4S9 558 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 TMCO5AQ8N6Q1 288 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 DDX1Q92499 740 aaKnown RBP7.76□□□□□ -1.17
HDAC9-214ENST00000441542 HPS1Q92902 700 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 C12orf43Q96C57 262 aaKnown RBP7.76□□□□□ -1.17
HDAC9-214ENST00000441542 SPATA17Q96L03 361 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 FIZ1Q96SL8 496 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 ZNF577Q9BSK1 485 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 WDR18Q9BV38 432 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 EPS8L2Q9H6S3 715 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 COQ10BQ9H8M1 238 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 TRPV5Q9NQA5 729 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 VAV3Q9UKW4 847 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 COL4A1P02462 1669 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 ALS2Q96Q42 1657 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 CYP3A7-CYP3A51PA0A087WV96 503 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 SDR42E2A6NKP2 422 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 GRIN3BO60391 1043 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 UFL1O94874 794 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 CSH1P0DML2 217 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 CSH2P0DML3 217 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 MCF2P10911 925 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 CCDC130P13994 396 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 ACOT2P49753 483 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 PGGT1BP53609 377 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 SLC18A1P54219 525 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 GTF2IP78347 998 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 MMRN1Q13201 1228 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 ITPK1Q13572 414 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 PRKG1Q13976 671 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 CDO1Q16878 200 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 CEP55Q53EZ4 464 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 RC3H1Q5TC82 1133 aaKnown RBP7.76□□□□□ -1.17
HDAC9-214ENST00000441542 TTC39BQ5VTQ0 682 aaPredicted RBP7.76□□□□□ -1.17
HDAC9-214ENST00000441542 TMEM198Q66K66 360 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 RNF19BQ6ZMZ0 732 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 TMEM26Q6ZUK4 368 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 CHSY1Q86X52 802 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 KATNAL2Q8IYT4 538 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 FEZF2Q8TBJ5 459 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 DDI1Q8WTU0 396 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 DEPDC1BQ8WUY9 529 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 RCN3Q96D15 328 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 ZNF778Q96MU6 729 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 KCNK16Q96T55 309 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 HAUS8Q9BT25 410 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 PCDHAC1Q9H158 963 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 PCDH9Q9HC56 1237 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 NRAPQ86VF7 1730 aa7.76□□□□□ -1.17
HDAC9-214ENST00000441542 CCDC78A2IDD5 438 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 PSTPIP1O43586 416 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 ZBTB14O43829 449 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 PSMA2P25787 234 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 SMARCA1P28370 1054 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 HOXA7P31268 230 aaPredicted RBP7.75□□□□□ -1.17
HDAC9-214ENST00000441542 CCR10P46092 362 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 PCYT1AP49585 367 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 BCAP31P51572 246 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 MS4A2Q01362 244 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 OGDHQ02218 1023 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 WASHC5Q12768 1159 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 VPS72Q15906 364 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 TRIM16LQ309B1 348 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 Q3C1V9 767 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 WDR44Q5JSH3 913 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 FGD3Q5JSP0 725 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 ELMSAN1Q6PJG2 1045 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 CES3Q6UWW8 571 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 SLC26A11Q86WA9 606 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 ERI1Q8IV48 349 aaKnown RBP7.75□□□□□ -1.17
HDAC9-214ENST00000441542 RCOR2Q8IZ40 523 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.75□□□□□ -1.17
HDAC9-214ENST00000441542 PIWIL2Q8TC59 973 aaKnown RBP7.75□□□□□ -1.17
HDAC9-214ENST00000441542 ACTRT2Q8TDY3 377 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 SLC44A1Q8WWI5 657 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 GIMAP1Q8WWP7 306 aa7.75□□□□□ -1.17
HDAC9-214ENST00000441542 LRTOMTQ8WZ04 291 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms