RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 TPGS2Q68CL5 300 aa20.41■□□□□ 0.86
APTR-204ENST00000440088 VPS52Q8N1B4 723 aa20.41■□□□□ 0.86
APTR-204ENST00000440088 CCHCR1Q8TD31 782 aa20.41■□□□□ 0.86
APTR-204ENST00000440088 FBXO32Q969P5 355 aa20.41■□□□□ 0.86
APTR-204ENST00000440088 TMEM121Q9BTD3 319 aa20.41■□□□□ 0.86
APTR-204ENST00000440088 FAM129AQ9BZQ8 928 aa20.41■□□□□ 0.86
APTR-204ENST00000440088 ZNF638Q14966 1978 aaKnown RBP20.4■□□□□ 0.86
APTR-204ENST00000440088 KIAA1671Q9BY89 1806 aa20.4■□□□□ 0.86
APTR-204ENST00000440088 IRAK2O43187 625 aa20.4■□□□□ 0.86
APTR-204ENST00000440088 KRT14P02533 472 aa20.4■□□□□ 0.86
APTR-204ENST00000440088 GOT1P17174 413 aa20.4■□□□□ 0.86
APTR-204ENST00000440088 PLTPP55058 493 aa20.4■□□□□ 0.86
APTR-204ENST00000440088 EIF3EP60228 445 aaKnown RBP20.4■□□□□ 0.86
APTR-204ENST00000440088 TRIP13Q15645 432 aaPredicted RBP20.4■□□□□ 0.86
APTR-204ENST00000440088 RNF34Q969K3 372 aa20.4■□□□□ 0.86
APTR-204ENST00000440088 FMO2Q99518 471 aa20.4■□□□□ 0.86
APTR-204ENST00000440088 PRDM16Q9HAZ2 1276 aa20.4■□□□□ 0.86
APTR-204ENST00000440088 ZDHHC18Q9NUE0 388 aa20.4■□□□□ 0.86
APTR-204ENST00000440088 GMIPQ9P107 970 aa20.4■□□□□ 0.86
APTR-204ENST00000440088 WHRNQ9P202 907 aa20.4■□□□□ 0.86
APTR-204ENST00000440088 HSFX1Q9UBD0 423 aa20.4■□□□□ 0.86
APTR-204ENST00000440088 H3BRJ5 948 aa20.39■□□□□ 0.86
APTR-204ENST00000440088 SGK1O00141 431 aa20.39■□□□□ 0.86
APTR-204ENST00000440088 ABLIM3O94929 683 aa20.39■□□□□ 0.86
APTR-204ENST00000440088 RBP3P10745 1247 aa20.39■□□□□ 0.86
APTR-204ENST00000440088 PSEN1P49768 467 aa20.39■□□□□ 0.86
APTR-204ENST00000440088 EIF4EBP2Q13542 120 aaPredicted RBP20.39■□□□□ 0.86
APTR-204ENST00000440088 C1orf228Q6PIY5 440 aa20.39■□□□□ 0.86
APTR-204ENST00000440088 NPNTQ6UXI9 565 aa20.39■□□□□ 0.86
APTR-204ENST00000440088 SNF8Q96H20 258 aa20.39■□□□□ 0.86
APTR-204ENST00000440088 TKTL2Q9H0I9 626 aa20.39■□□□□ 0.86
APTR-204ENST00000440088 TMEM51Q9NW97 253 aa20.39■□□□□ 0.86
APTR-204ENST00000440088 OSER1Q9NX31 292 aa20.39■□□□□ 0.86
APTR-204ENST00000440088 GREB1Q4ZG55 1949 aa20.39■□□□□ 0.86
APTR-204ENST00000440088 CREB3O43889 395 aa20.39■□□□□ 0.85
APTR-204ENST00000440088 ATF2P15336 505 aa20.39■□□□□ 0.85
APTR-204ENST00000440088 ATF6P18850 670 aa20.39■□□□□ 0.85
APTR-204ENST00000440088 KLRC2P26717 231 aa20.39■□□□□ 0.85
APTR-204ENST00000440088 ADCY8P40145 1251 aa20.39■□□□□ 0.85
APTR-204ENST00000440088 FBXO25Q8TCJ0 367 aa20.39■□□□□ 0.85
APTR-204ENST00000440088 CASP10Q92851 521 aa20.39■□□□□ 0.85
APTR-204ENST00000440088 VIPAS39Q9H9C1 493 aa20.39■□□□□ 0.85
APTR-204ENST00000440088 TLR8Q9NR97 1041 aaKnown RBP20.39■□□□□ 0.85
APTR-204ENST00000440088 MRPL17Q9NRX2 175 aaKnown RBP20.39■□□□□ 0.85
APTR-204ENST00000440088 CLIC5Q9NZA1 410 aa20.39■□□□□ 0.85
APTR-204ENST00000440088 HEY1Q9Y5J3 304 aa20.39■□□□□ 0.85
APTR-204ENST00000440088 FGF18O76093 207 aa20.38■□□□□ 0.85
APTR-204ENST00000440088 ITIH2P19823 946 aa20.38■□□□□ 0.85
APTR-204ENST00000440088 IVDP26440 423 aa20.38■□□□□ 0.85
APTR-204ENST00000440088 TAF10Q12962 218 aa20.38■□□□□ 0.85
APTR-204ENST00000440088 MTMR3Q13615 1198 aa20.38■□□□□ 0.85
APTR-204ENST00000440088 ZDHHC24Q6UX98 284 aa20.38■□□□□ 0.85
APTR-204ENST00000440088 GPR65Q8IYL9 337 aa20.38■□□□□ 0.85
APTR-204ENST00000440088 GIPC2Q8TF65 315 aa20.38■□□□□ 0.85
APTR-204ENST00000440088 RSAD2Q8WXG1 361 aa20.38■□□□□ 0.85
APTR-204ENST00000440088 CLP1Q92989 425 aaKnown RBP20.38■□□□□ 0.85
APTR-204ENST00000440088 SERPINB11Q96P15 392 aa20.38■□□□□ 0.85
APTR-204ENST00000440088 ANLNQ9NQW6 1124 aa20.38■□□□□ 0.85
APTR-204ENST00000440088 SFMBT1Q9UHJ3 866 aa20.38■□□□□ 0.85
APTR-204ENST00000440088 SLC4A7Q9Y6M7 1214 aa20.38■□□□□ 0.85
APTR-204ENST00000440088 LAMA2P24043 3122 aaKnown RBP20.38■□□□□ 0.85
APTR-204ENST00000440088 I6L893 689 aaPredicted RBP20.37■□□□□ 0.85
APTR-204ENST00000440088 EEF2KO00418 725 aaKnown RBP20.37■□□□□ 0.85
APTR-204ENST00000440088 SYN1P17600 705 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 NR2C2P49116 596 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 VPS41P49754 854 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 ZNF135P52742 658 aaPredicted RBP20.37■□□□□ 0.85
APTR-204ENST00000440088 BRMS1LQ5PSV4 323 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 MSANTD2Q6P1R3 559 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 ZC3H18Q86VM9 953 aaKnown RBP20.37■□□□□ 0.85
APTR-204ENST00000440088 HERVK_113Q902F9 699 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 ART4Q93070 314 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 RAD9AQ99638 391 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 ARHGEF4Q9NR80 690 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.37■□□□□ 0.85
APTR-204ENST00000440088 NUDT5Q9UKK9 219 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 SLC38A8A6NNN8 435 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 IFNB1P01574 187 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 LINC00271P0C7V0 271 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 AMPD1P23109 780 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 DNAJB2P25686 324 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 CCR1P32246 355 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 SEMA3BQ13214 749 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 RAB33AQ14088 237 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 HERC6Q8IVU3 1022 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 MREGQ8N565 214 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 LRRC45Q96CN5 670 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 TTLL2Q9BWV7 592 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 PCDH9Q9HC56 1237 aa20.37■□□□□ 0.85
APTR-204ENST00000440088 MTRF1LQ9UGC7 380 aaKnown RBP20.37■□□□□ 0.85
APTR-204ENST00000440088 STIP1P31948 543 aaKnown RBP20.36■□□□□ 0.85
APTR-204ENST00000440088 CREMQ03060 361 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 NCBP2-AS2Q69YL0 99 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 DARS2Q6PI48 645 aaKnown RBP20.36■□□□□ 0.85
APTR-204ENST00000440088 RFX8Q6ZV50 586 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 GLIS1Q8NBF1 620 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 BBOF1Q8ND07 529 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 PHOSPHO2Q8TCD6 241 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 AUTS2Q8WXX7 1259 aa20.36■□□□□ 0.85
APTR-204ENST00000440088 HTATIP2Q9BUP3 242 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms