RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 TGM2P21980 687 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 PRKCHP24723 683 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 MXRA7P84157 204 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 ARHGAP8P85298 464 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 BLMHQ13867 455 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 PPM1JQ5JR12 505 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 SMC1BQ8NDV3 1235 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 GSDMBQ8TAX9 411 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 THTPAQ9BU02 230 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 GJD2Q9UKL4 321 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 ITGA11Q9UKX5 1188 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 PSAT1Q9Y617 370 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 A0A0G2JLL6 359 aaPredicted RBP14□□□□□ -0.17
HERPUD1-204ENST00000439977 TGDSO95455 350 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 TSHRP16473 764 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 HEATR6Q6AI08 1181 aaKnown RBP14□□□□□ -0.17
HERPUD1-204ENST00000439977 PRRT2Q7Z6L0 340 aaPredicted RBP14□□□□□ -0.17
HERPUD1-204ENST00000439977 STKLD1Q8NE28 680 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 SCG3Q8WXD2 468 aaKnown RBP14□□□□□ -0.17
HERPUD1-204ENST00000439977 STMN2Q93045 179 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 CSPG4P5Q96PW8 444 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 KCTD15Q96SI1 283 aaPredicted RBP14□□□□□ -0.17
HERPUD1-204ENST00000439977 VRTNQ9H8Y1 702 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 CDHR5Q9HBB8 845 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 GOLGA2P5Q9HBQ8 144 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 DTLQ9NZJ0 730 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 MCM3APO60318 1980 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 DNAJC25-GNG10A0A024R161 153 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14□□□□□ -0.17
HERPUD1-204ENST00000439977 DPPA5A6NC42 116 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 NVLO15381 856 aaKnown RBP14□□□□□ -0.17
HERPUD1-204ENST00000439977 DNAJC6O75061 913 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 USP12O75317 370 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 GCKP35557 465 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 ABCG1P45844 678 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 SLC26A2P50443 739 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 AP1B1Q10567 949 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 POU5F2Q8N7G0 328 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 CCNYQ8ND76 341 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 TBCBQ99426 244 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 PNPLA8Q9NP80 782 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 MTMR10Q9NXD2 777 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 PPME1Q9Y570 386 aa14□□□□□ -0.17
HERPUD1-204ENST00000439977 VAV1P15498 845 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 OCRLQ01968 901 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 STX3Q13277 289 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 TMEM110Q86TL2 294 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 CRLF3Q8IUI8 442 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 DCPSQ96C86 337 aaKnown RBP13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 AGAP3Q96P47 875 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 SLC4A5Q9BY07 1137 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 ACSS2Q9NR19 701 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 SETD4Q9NVD3 440 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 ZNF358Q9NW07 568 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 POLR2AP24928 1970 aaKnown RBP13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 H3BRB1 525 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 CREB3O43889 395 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 PSMG1O95456 288 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 SLC25A27O95847 323 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 ATP6V1C1P21283 382 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 MGAT1P26572 445 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 PKDCCQ504Y2 493 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 FASTKD1Q53R41 847 aaKnown RBP13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 ATG16L1Q676U5 607 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 MTHFD1LQ6UB35 978 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 RSPH3Q86UC2 560 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 RTP4Q96DX8 246 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 ZNF670Q9BS34 389 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 TUT1Q9H6E5 874 aaKnown RBP13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 SIRPGQ9P1W8 387 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 STOML1Q9UBI4 398 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 C2CD2Q9Y426 696 aa13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 MYO18AQ92614 2054 aaKnown RBP13.99□□□□□ -0.17
HERPUD1-204ENST00000439977 TRDMT1O14717 391 aaKnown RBP13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 BPGMP07738 259 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 MLH1P40692 756 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 TEX44Q53QW1 395 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 ATG14Q6ZNE5 492 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 CDKL3Q8IVW4 592 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 HACE1Q8IYU2 909 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 NME8Q8N427 588 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 USP6NLQ92738 828 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 PPP1R12CQ9BZL4 782 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 NXF3Q9H4D5 531 aaKnown RBP13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 ZNF180Q9UJW8 692 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 SPDYE5A6NIY4 337 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 ENO4A6NNW6 628 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 KCNK1O00180 336 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 TPP1O14773 563 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 ERVK-10P10266 1014 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 CCNHP51946 323 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 TSNAXIP1Q2TAA8 658 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 ZNF484Q5JVG2 852 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 SPDYAQ5MJ70 313 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 N4BP2L1Q5TBK1 243 aaPredicted RBP13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 VWA5B1Q5TIE3 1220 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 NCBP2-AS2Q69YL0 99 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 EP400NLQ6ZTU2 488 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 EFCAB3Q8N7B9 438 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms