RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 EDEM1Q92611 657 aa21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 KREMEN1Q96MU8 473 aa21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 ABCC13Q9NSE7 274 aa21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 CNTN6Q9UQ52 1028 aa21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 HBS1LQ9Y450 684 aaKnown RBP21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 PLXND1Q9Y4D7 1925 aa21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 GFRA2O00451 464 aa21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 CALCAP01258 141 aa21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 AFPP02771 609 aaKnown RBP21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 BRD2P25440 801 aaKnown RBP21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 PPM1JQ5JR12 505 aa21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 SPDYCQ5MJ68 293 aa21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 IL31Q6EBC2 164 aa21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 KIAA1211LQ6NV74 962 aa21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 FMNL3Q8IVF7 1028 aa21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 IPO4Q8TEX9 1081 aaKnown RBP21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 RNF139Q8WU17 664 aa21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 DDX1Q92499 740 aaKnown RBP21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 PIWIL1Q96J94 861 aaKnown RBP21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 CACNA2D2Q9NY47 1150 aa21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 KIAA1468Q9P260 1216 aa21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 ACACBO00763 2458 aa21.23■□□□□ 0.99
NCKIPSD-206ENST00000439518 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.22■□□□□ 0.99
NCKIPSD-206ENST00000439518 MAP3K13O43283 966 aa21.22■□□□□ 0.99
NCKIPSD-206ENST00000439518 LCP1P13796 627 aa21.22■□□□□ 0.99
NCKIPSD-206ENST00000439518 DHPSP49366 369 aaPredicted RBP21.22■□□□□ 0.99
NCKIPSD-206ENST00000439518 RGS7P49802 495 aa21.22■□□□□ 0.99
NCKIPSD-206ENST00000439518 UBE2HP62256 183 aa21.22■□□□□ 0.99
NCKIPSD-206ENST00000439518 GEN1Q17RS7 908 aa21.22■□□□□ 0.99
NCKIPSD-206ENST00000439518 MSANTD2Q6P1R3 559 aa21.22■□□□□ 0.99
NCKIPSD-206ENST00000439518 TMEFF1Q8IYR6 380 aa21.22■□□□□ 0.99
NCKIPSD-206ENST00000439518 IRGQQ8WZA9 623 aa21.22■□□□□ 0.99
NCKIPSD-206ENST00000439518 SLC2A11Q9BYW1 496 aa21.22■□□□□ 0.99
NCKIPSD-206ENST00000439518 INTS2Q9H0H0 1204 aaKnown RBP21.22■□□□□ 0.99
NCKIPSD-206ENST00000439518 CALCOCO1Q9P1Z2 691 aa21.22■□□□□ 0.99
NCKIPSD-206ENST00000439518 SFMBT1Q9UHJ3 866 aa21.22■□□□□ 0.99
NCKIPSD-206ENST00000439518 STOML2Q9UJZ1 356 aa21.22■□□□□ 0.99
NCKIPSD-206ENST00000439518 LNP1A1A4G5 178 aa21.21■□□□□ 0.99
NCKIPSD-206ENST00000439518 WASH3PC4AMC7 463 aa21.21■□□□□ 0.99
NCKIPSD-206ENST00000439518 M0QYV0 167 aa21.21■□□□□ 0.99
NCKIPSD-206ENST00000439518 CYBBP04839 570 aa21.21■□□□□ 0.99
NCKIPSD-206ENST00000439518 PTGER3P43115 390 aa21.21■□□□□ 0.99
NCKIPSD-206ENST00000439518 HARS2P49590 506 aaKnown RBP21.21■□□□□ 0.99
NCKIPSD-206ENST00000439518 RNF43Q68DV7 783 aa21.21■□□□□ 0.99
NCKIPSD-206ENST00000439518 HSFY1Q96LI6 401 aa21.21■□□□□ 0.99
NCKIPSD-206ENST00000439518 MED15Q96RN5 788 aa21.21■□□□□ 0.99
NCKIPSD-206ENST00000439518 RWDD2AQ9UIY3 292 aa21.21■□□□□ 0.99
NCKIPSD-206ENST00000439518 CLEC4EQ9ULY5 219 aa21.21■□□□□ 0.99
NCKIPSD-206ENST00000439518 KHNYNO15037 678 aaKnown RBP21.2■□□□□ 0.98
NCKIPSD-206ENST00000439518 FGFR1OPO95684 399 aaKnown RBP21.2■□□□□ 0.98
NCKIPSD-206ENST00000439518 LATS1O95835 1130 aa21.2■□□□□ 0.98
NCKIPSD-206ENST00000439518 ADRB1P08588 477 aa21.2■□□□□ 0.98
NCKIPSD-206ENST00000439518 NDUFV2P19404 249 aa21.2■□□□□ 0.98
NCKIPSD-206ENST00000439518 ENPP2Q13822 863 aa21.2■□□□□ 0.98
NCKIPSD-206ENST00000439518 CAMK4Q16566 473 aa21.2■□□□□ 0.98
NCKIPSD-206ENST00000439518 DDI1Q8WTU0 396 aa21.2■□□□□ 0.98
NCKIPSD-206ENST00000439518 PIGKQ92643 395 aa21.2■□□□□ 0.98
NCKIPSD-206ENST00000439518 EDEM2Q9BV94 578 aa21.2■□□□□ 0.98
NCKIPSD-206ENST00000439518 THAP10Q9P2Z0 257 aaPredicted RBP21.2■□□□□ 0.98
NCKIPSD-206ENST00000439518 RAD54BQ9Y620 910 aa21.2■□□□□ 0.98
NCKIPSD-206ENST00000439518 STON1Q9Y6Q2 735 aa21.2■□□□□ 0.98
NCKIPSD-206ENST00000439518 EPG5Q9HCE0 2579 aa21.2■□□□□ 0.98
NCKIPSD-206ENST00000439518 CHD8Q9HCK8 2581 aa21.2■□□□□ 0.98
NCKIPSD-206ENST00000439518 IGHV1OR15-9A0A0B4J2B8 117 aa21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 PATE3B3GLJ2 98 aa21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 PIK3R2O00459 728 aa21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 NPC1O15118 1278 aa21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 ZBTB24O43167 697 aaPredicted RBP21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 MSI1O43347 362 aaKnown RBP21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 IGLV3-27P01718 113 aa21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 HOXD9P28356 352 aaPredicted RBP21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 RPL34P49207 117 aaKnown RBP21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 MPPE1Q53F39 396 aa21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 ADGRF1Q5T601 910 aa21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 SLC36A4Q6YBV0 504 aa21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 CLEC4CQ8WTT0 213 aa21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 ERLEC1Q96DZ1 483 aa21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 MRGPRX1Q96LB2 322 aa21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 LSM14BQ9BX40 385 aaKnown RBP21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 TMEM74BQ9NUR3 256 aa21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 EVLQ9UI08 416 aaPredicted RBP21.19■□□□□ 0.98
NCKIPSD-206ENST00000439518 ZNF217O75362 1048 aa21.18■□□□□ 0.98
NCKIPSD-206ENST00000439518 FBXO21O94952 628 aa21.18■□□□□ 0.98
NCKIPSD-206ENST00000439518 LTFP02788 710 aa21.18■□□□□ 0.98
NCKIPSD-206ENST00000439518 GPD2P43304 727 aa21.18■□□□□ 0.98
NCKIPSD-206ENST00000439518 IRX4P78413 519 aa21.18■□□□□ 0.98
NCKIPSD-206ENST00000439518 EIF4HQ15056 248 aaKnown RBP21.18■□□□□ 0.98
NCKIPSD-206ENST00000439518 ARMCX6Q7L4S7 300 aa21.18■□□□□ 0.98
NCKIPSD-206ENST00000439518 ANKS1BQ7Z6G8 1248 aa21.18■□□□□ 0.98
NCKIPSD-206ENST00000439518 IRF2BP1Q8IU81 584 aa21.18■□□□□ 0.98
NCKIPSD-206ENST00000439518 SYT12Q8IV01 421 aa21.18■□□□□ 0.98
NCKIPSD-206ENST00000439518 SLC6A17Q9H1V8 727 aa21.18■□□□□ 0.98
NCKIPSD-206ENST00000439518 UBE2TQ9NPD8 197 aaPredicted RBP21.18■□□□□ 0.98
NCKIPSD-206ENST00000439518 ELOVL2Q9NXB9 296 aa21.18■□□□□ 0.98
NCKIPSD-206ENST00000439518 CHMP5Q9NZZ3 219 aa21.18■□□□□ 0.98
NCKIPSD-206ENST00000439518 TNRC6BQ9UPQ9 1833 aaKnown RBP21.18■□□□□ 0.98
NCKIPSD-206ENST00000439518 C4orf47A7E2U8 309 aa21.17■□□□□ 0.98
NCKIPSD-206ENST00000439518 AP5Z1O43299 807 aa21.17■□□□□ 0.98
NCKIPSD-206ENST00000439518 TSPAN3O60637 253 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms