RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 THSD1Q9NS62 852 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 DDX56Q9NY93 547 aaKnown RBP3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 ITGB1BP2Q9UKP3 347 aa3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 AGO2Q9UKV8 859 aaKnown RBP3.82□□□□□ -1.8
HMGB1P31-201ENST00000437242 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 A0A0G2JK05 382 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 IFITM10A6NMD0 228 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 PRPF4O43172 522 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 WDR47O94967 919 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 IL1R1P14778 569 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 IDUAP35475 653 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 ANAPC15P60006 121 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 IGBP1P78318 339 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 DNASE1L3Q13609 305 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 DLGAP5Q15398 846 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 GRHL2Q6ISB3 625 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 APOA5Q6Q788 366 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 NR2C2APQ86WQ0 139 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 SPATA2LQ8IUW3 424 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 TPH2Q8IWU9 490 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 IPCEF1Q8WWN9 437 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 LPAR1Q92633 364 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 P2RY11Q96G91 374 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 ZDHHC12Q96GR4 267 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 PRR11Q96HE9 360 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 SENP7Q9BQF6 1050 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 RNF26Q9BY78 433 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 ASNSD1Q9NWL6 643 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 DKK4Q9UBT3 224 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 TPCN1Q9ULQ1 816 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 PCDHA7Q9UN72 937 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 HPSEQ9Y251 543 aa3.81□□□□□ -1.8
HMGB1P31-201ENST00000437242 COL15A1P39059 1388 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 TTC34A8MYJ7 566 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 H0YGN5 161 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 TNFRSF13BO14836 293 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 FRS3O43559 492 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 CTNND1O60716 968 aaKnown RBP3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 ALDH1L1O75891 902 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 HTR7P34969 479 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 ENTPD1P49961 510 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 DGKQP52824 942 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 FHL3Q13643 280 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 CNN3Q15417 329 aaKnown RBP3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 CNGA2Q16280 664 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 MANEALQ5VSG8 457 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 NUGGCQ68CJ6 796 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 PLAG1Q6DJT9 500 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 MBD3L2Q8NHZ7 208 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 NUDCD2Q8WVJ2 157 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 KAT2BQ92831 832 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 NEUROG1Q92886 237 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 MSI2Q96DH6 328 aaKnown RBP3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 HTATIP2Q9BUP3 242 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 TTLL2Q9BWV7 592 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 CHST8Q9H2A9 424 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 TMEM60Q9H2L4 133 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 ABHD10Q9NUJ1 306 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 TYW1Q9NV66 732 aaKnown RBP3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 IPO11Q9UI26 975 aaKnown RBP3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 VPS4AQ9UN37 437 aa3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 TRIP12Q14669 1992 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P31-201ENST00000437242 PRPF3O43395 683 aaKnown RBP3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 ATG13O75143 517 aa3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 MLH1P40692 756 aa3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 CARSP49589 748 aaKnown RBP3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 MTAPQ13126 283 aa3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 NFATC4Q14934 902 aa3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 SMTNL2Q2TAL5 461 aa3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 C9orf50Q5SZB4 431 aa3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 GSG1LQ6UXU4 331 aa3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 EPM2AIP1Q7L775 607 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 OIT3Q8WWZ8 545 aa3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 NR4A3Q92570 626 aa3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 AKAP1Q92667 903 aaKnown RBP eCLIP3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 CELF1Q92879 486 aaKnown RBP3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 SELENOOQ9BVL4 669 aa3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 RTFDC1Q9BY42 306 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 COL20A1Q9P218 1284 aa3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 RGS17Q9UGC6 210 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 OGDHLQ9ULD0 1010 aa3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 PCDHB2Q9Y5E7 798 aa3.79□□□□□ -1.8
HMGB1P31-201ENST00000437242 KIR2DS5A0A0G2JLQ3 304 aa3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 KIR2DS3K7RE56 304 aa3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 IGKV3-20P01619 116 aa3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 BTF3P20290 206 aaKnown RBP3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 NDUFS1P28331 727 aa3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 DUSP1P28562 367 aa3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 HOXA11P31270 313 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 EGR4Q05215 589 aa3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 LTBQ06643 244 aa3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 MCL1Q07820 350 aa3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 TTF1Q15361 905 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 AASDHQ4L235 1098 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 DGKKQ5KSL6 1271 aa3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 C6orf10Q5SRN2 563 aa3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 GFI1BQ5VTD9 330 aa3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 SLC39A5Q6ZMH5 540 aa3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 KIAA0319LQ8IZA0 1049 aa3.78□□□□□ -1.8
HMGB1P31-201ENST00000437242 DNASE2BQ8WZ79 361 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms