RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 ADAMTS9Q9P2N4 1935 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 ASCC3Q8N3C0 2202 aaKnown RBP16.47■□□□□ 0.23
NUP50-210ENST00000434760 MSI1O43347 362 aaKnown RBP16.47■□□□□ 0.23
NUP50-210ENST00000434760 RHOBTB1O94844 696 aa16.47■□□□□ 0.23
NUP50-210ENST00000434760 IGLV3-27P01718 113 aa16.47■□□□□ 0.23
NUP50-210ENST00000434760 WASP42768 502 aa16.47■□□□□ 0.23
NUP50-210ENST00000434760 RGS7P49802 495 aa16.47■□□□□ 0.23
NUP50-210ENST00000434760 GEN1Q17RS7 908 aa16.47■□□□□ 0.23
NUP50-210ENST00000434760 BSPRYQ5W0U4 402 aa16.47■□□□□ 0.23
NUP50-210ENST00000434760 FMNL3Q8IVF7 1028 aa16.47■□□□□ 0.23
NUP50-210ENST00000434760 SIX6OS1Q8N1H7 587 aa16.47■□□□□ 0.23
NUP50-210ENST00000434760 C12orf50Q8NA57 414 aaPredicted RBP16.47■□□□□ 0.23
NUP50-210ENST00000434760 CLEC4CQ8WTT0 213 aa16.47■□□□□ 0.23
NUP50-210ENST00000434760 EDEM1Q92611 657 aa16.47■□□□□ 0.23
NUP50-210ENST00000434760 PIWIL1Q96J94 861 aaKnown RBP16.47■□□□□ 0.23
NUP50-210ENST00000434760 IPO9Q96P70 1041 aaKnown RBP16.47■□□□□ 0.23
NUP50-210ENST00000434760 SRRTQ9BXP5 876 aaKnown RBP16.47■□□□□ 0.23
NUP50-210ENST00000434760 CALCOCO1Q9P1Z2 691 aa16.47■□□□□ 0.23
NUP50-210ENST00000434760 RWDD2AQ9UIY3 292 aa16.47■□□□□ 0.23
NUP50-210ENST00000434760 STOML2Q9UJZ1 356 aa16.47■□□□□ 0.23
NUP50-210ENST00000434760 CLEC4EQ9ULY5 219 aa16.47■□□□□ 0.23
NUP50-210ENST00000434760 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.47■□□□□ 0.23
NUP50-210ENST00000434760 SPEGQ15772 3267 aa16.47■□□□□ 0.23
NUP50-210ENST00000434760 EPG5Q9HCE0 2579 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 LNP1A1A4G5 178 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 TM4SF5O14894 197 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 NDUFV2P19404 249 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 HOXD9P28356 352 aaPredicted RBP16.46■□□□□ 0.23
NUP50-210ENST00000434760 CHKAP35790 457 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 RPL34P49207 117 aaKnown RBP16.46■□□□□ 0.23
NUP50-210ENST00000434760 CREB5Q02930 508 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 CETN1Q12798 172 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 ENPP2Q13822 863 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 STILQ15468 1287 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 CNGA2Q16280 664 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 CAMK4Q16566 473 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 RNF43Q68DV7 783 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 TRIM65Q6PJ69 517 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 IRF2BP1Q8IU81 584 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 EHBP1Q8NDI1 1231 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 IRGQQ8WZA9 623 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 SPACA7Q96KW9 195 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 CACNA2D2Q9NY47 1150 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 BCCIPQ9P287 314 aaKnown RBP eCLIP16.46■□□□□ 0.23
NUP50-210ENST00000434760 SFMBT1Q9UHJ3 866 aa16.46■□□□□ 0.23
NUP50-210ENST00000434760 HBS1LQ9Y450 684 aaKnown RBP16.46■□□□□ 0.23
NUP50-210ENST00000434760 LCP1P13796 627 aa16.45■□□□□ 0.22
NUP50-210ENST00000434760 MEA1Q16626 185 aa16.45■□□□□ 0.22
NUP50-210ENST00000434760 PEAR1Q5VY43 1037 aaPredicted RBP16.45■□□□□ 0.22
NUP50-210ENST00000434760 NUDT18Q6ZVK8 323 aa16.45■□□□□ 0.22
NUP50-210ENST00000434760 CYP2U1Q7Z449 544 aa16.45■□□□□ 0.22
NUP50-210ENST00000434760 CHPFQ8IZ52 775 aa16.45■□□□□ 0.22
NUP50-210ENST00000434760 IPO4Q8TEX9 1081 aaKnown RBP16.45■□□□□ 0.22
NUP50-210ENST00000434760 EDEM2Q9BV94 578 aa16.45■□□□□ 0.22
NUP50-210ENST00000434760 CD93Q9NPY3 652 aa16.45■□□□□ 0.22
NUP50-210ENST00000434760 ABCC13Q9NSE7 274 aa16.45■□□□□ 0.22
NUP50-210ENST00000434760 CHMP5Q9NZZ3 219 aa16.45■□□□□ 0.22
NUP50-210ENST00000434760 RAD54BQ9Y620 910 aa16.45■□□□□ 0.22
NUP50-210ENST00000434760 CEP295Q9C0D2 2601 aa16.45■□□□□ 0.22
NUP50-210ENST00000434760 BECN2A8MW95 431 aa16.44■□□□□ 0.22
NUP50-210ENST00000434760 PATE3B3GLJ2 98 aa16.44■□□□□ 0.22
NUP50-210ENST00000434760 PIK3R2O00459 728 aa16.44■□□□□ 0.22
NUP50-210ENST00000434760 CAVIN2O95810 425 aa16.44■□□□□ 0.22
NUP50-210ENST00000434760 LATS1O95835 1130 aa16.44■□□□□ 0.22
NUP50-210ENST00000434760 LTFP02788 710 aa16.44■□□□□ 0.22
NUP50-210ENST00000434760 FYNP06241 537 aa16.44■□□□□ 0.22
NUP50-210ENST00000434760 PTGER3P43115 390 aa16.44■□□□□ 0.22
NUP50-210ENST00000434760 GPD2P43304 727 aa16.44■□□□□ 0.22
NUP50-210ENST00000434760 APBA1Q02410 837 aa16.44■□□□□ 0.22
NUP50-210ENST00000434760 STPG1Q5TH74 334 aa16.44■□□□□ 0.22
NUP50-210ENST00000434760 TMEM215Q68D42 235 aa16.44■□□□□ 0.22
NUP50-210ENST00000434760 ANKS1BQ7Z6G8 1248 aa16.44■□□□□ 0.22
NUP50-210ENST00000434760 HSFY1Q96LI6 401 aa16.44■□□□□ 0.22
NUP50-210ENST00000434760 CLSTN2Q9H4D0 955 aa16.44■□□□□ 0.22
NUP50-210ENST00000434760 MAP1BP46821 2468 aaKnown RBP16.44■□□□□ 0.22
NUP50-210ENST00000434760 NUMA1Q14980 2115 aa16.43■□□□□ 0.22
NUP50-210ENST00000434760 KMT2BQ9UMN6 2715 aaPredicted RBP16.43■□□□□ 0.22
NUP50-210ENST00000434760 IGHV1OR15-9A0A0B4J2B8 117 aa16.43■□□□□ 0.22
NUP50-210ENST00000434760 WASH3PC4AMC7 463 aa16.43■□□□□ 0.22
NUP50-210ENST00000434760 IL12RB1P42701 662 aa16.43■□□□□ 0.22
NUP50-210ENST00000434760 SGSHP51688 502 aa16.43■□□□□ 0.22
NUP50-210ENST00000434760 PPM1JQ5JR12 505 aa16.43■□□□□ 0.22
NUP50-210ENST00000434760 DENND1BQ6P3S1 775 aa16.43■□□□□ 0.22
NUP50-210ENST00000434760 GJB7Q6PEY0 223 aa16.43■□□□□ 0.22
NUP50-210ENST00000434760 RNF139Q8WU17 664 aa16.43■□□□□ 0.22
NUP50-210ENST00000434760 MRGPRX1Q96LB2 322 aa16.43■□□□□ 0.22
NUP50-210ENST00000434760 CRACR2AQ9BSW2 395 aa16.43■□□□□ 0.22
NUP50-210ENST00000434760 SLC6A17Q9H1V8 727 aa16.43■□□□□ 0.22
NUP50-210ENST00000434760 ACP6Q9NPH0 428 aa16.43■□□□□ 0.22
NUP50-210ENST00000434760 THAP10Q9P2Z0 257 aaPredicted RBP16.43■□□□□ 0.22
NUP50-210ENST00000434760 CYTH4Q9UIA0 394 aa16.43■□□□□ 0.22
NUP50-210ENST00000434760 AJAP1Q9UKB5 411 aaPredicted RBP16.43■□□□□ 0.22
NUP50-210ENST00000434760 STON1Q9Y6Q2 735 aa16.43■□□□□ 0.22
NUP50-210ENST00000434760 ATXN2Q99700 1313 aaKnown RBP16.43■□□□□ 0.22
NUP50-210ENST00000434760 TP53BP1Q12888 1972 aaPredicted RBP16.42■□□□□ 0.22
NUP50-210ENST00000434760 WDFY3Q8IZQ1 3526 aa16.42■□□□□ 0.22
NUP50-210ENST00000434760 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.42■□□□□ 0.22
NUP50-210ENST00000434760 FBXO21O94952 628 aa16.42■□□□□ 0.22
NUP50-210ENST00000434760 ADRB1P08588 477 aa16.42■□□□□ 0.22
NUP50-210ENST00000434760 KRT5P13647 590 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms