RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 LRRC39Q96DD0 335 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 CYTH2Q99418 400 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 KDM4CQ9H3R0 1056 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 TRABDQ9H4I3 376 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 RAB6BQ9NRW1 208 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 DDX43Q9NXZ2 648 aaKnown RBP13.3□□□□□ -0.28
DDX56-204ENST00000431640 COL4A6Q14031 1691 aa13.3□□□□□ -0.28
DDX56-204ENST00000431640 HCRTO43612 131 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 ZNF623O75123 536 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 FAM200BP0CF97 657 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 SKIP12755 728 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 CREB1P16220 341 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 RBL1P28749 1068 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 IFNAR2P48551 515 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 SULT1E1P49888 294 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 BFSP2Q13515 415 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 SLC45A4Q5BKX6 768 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 DSTYKQ6XUX3 929 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 MCUQ8NE86 351 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 MGARPQ8TDB4 240 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 CLEC4CQ8WTT0 213 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 NT5C3BQ969T7 300 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 ALKBH8Q96BT7 664 aaKnown RBP13.29□□□□□ -0.28
DDX56-204ENST00000431640 SLC9A7Q96T83 725 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 PNPLA8Q9NP80 782 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 RRN3Q9NYV6 651 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 CDH9Q9ULB4 789 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 FZD10Q9ULW2 581 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 PTPRSQ13332 1948 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 CLUHO75153 1309 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 MICAL3Q7RTP6 2002 aa13.29□□□□□ -0.28
DDX56-204ENST00000431640 TCRBV7S3A2A0A539 114 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 H3BRJ5 948 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 TRDMT1O14717 391 aaKnown RBP13.28□□□□□ -0.28
DDX56-204ENST00000431640 ATP2C2O75185 946 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 TMEM63AO94886 807 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 PCSK1P29120 753 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 SSTR1P30872 391 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 SARNPP82979 210 aaKnown RBP13.28□□□□□ -0.28
DDX56-204ENST00000431640 ADIGQ0VDE8 80 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 SPARCL1Q14515 664 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 MSS51Q4VC12 460 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 LACTB2Q53H82 288 aaPredicted RBP13.28□□□□□ -0.28
DDX56-204ENST00000431640 PLEKHG4Q58EX7 1191 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 DCAF6Q58WW2 860 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 PAQR9Q6ZVX9 377 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 GSTCDQ8NEC7 633 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 FBF1Q8TES7 1133 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 FAM149B1Q96BN6 582 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 PGBD4Q96DM1 585 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 ZFP42Q96MM3 310 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 CSPG4P5Q96PW8 444 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 SLC2A13Q96QE2 648 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 GAD1Q99259 594 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 NPY6RQ99463 290 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 ELAC2Q9BQ52 826 aaKnown RBP13.28□□□□□ -0.28
DDX56-204ENST00000431640 DHRS4Q9BTZ2 278 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 POPDC2Q9HBU9 364 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 TMEM39AQ9NV64 488 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 ETNK2Q9NVF9 386 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 MTMR10Q9NXD2 777 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 TEX264Q9Y6I9 313 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 IKBKGQ9Y6K9 419 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 SQORQ9Y6N5 450 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 IQANK1A0A1B0GTG1 560 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 ARHGEF37A1IGU5 675 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 ARL5CA6NH57 179 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 CCT8L1PA6NM43 557 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 TCP11X1B4DZS4 312 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 TRIM66O15016 1216 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 KIAA0355O15063 1070 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 STK10O94804 968 aaKnown RBP13.28□□□□□ -0.28
DDX56-204ENST00000431640 FSBPO95073 299 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 CPP00450 1065 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 CXCL10P02778 98 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 TFE3P19532 575 aaPredicted RBP13.28□□□□□ -0.28
DDX56-204ENST00000431640 TKTP29401 623 aaKnown RBP13.28□□□□□ -0.28
DDX56-204ENST00000431640 MLH1P40692 756 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 ELK3P41970 407 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 ADCY1Q08828 1119 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 MPP2Q14168 576 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 LRRC14Q15048 493 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 MDH1BQ5I0G3 518 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 CLEC20AQ6ZU45 233 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 PDZD4Q76G19 769 aaPredicted RBP13.28□□□□□ -0.28
DDX56-204ENST00000431640 BNIPLQ7Z465 357 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 METTL23Q86XA0 190 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 CNPY4Q8N129 248 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 VPS52Q8N1B4 723 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 DBF4BQ8NFT6 615 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 KCTD15Q96SI1 283 aaPredicted RBP13.28□□□□□ -0.28
DDX56-204ENST00000431640 SYT15Q9BQS2 421 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 CNGB3Q9NQW8 809 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 PRDM5Q9NQX1 630 aaPredicted RBP13.28□□□□□ -0.28
DDX56-204ENST00000431640 DSEQ9UL01 958 aa13.28□□□□□ -0.28
DDX56-204ENST00000431640 C9IYK1 514 aa13.27□□□□□ -0.29
DDX56-204ENST00000431640 ANKRD65E5RJM6 399 aa13.27□□□□□ -0.29
DDX56-204ENST00000431640 CAPN9O14815 690 aa13.27□□□□□ -0.29
DDX56-204ENST00000431640 SNX3O60493 162 aa13.27□□□□□ -0.29
DDX56-204ENST00000431640 DGKIO75912 1065 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms