RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 FMNL3Q8IVF7 1028 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 DRC7Q8IY82 874 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 PGBD3Q8N328 593 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 OR8K1Q8NGG5 319 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 RIN3Q8TB24 985 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 CLEC4CQ8WTT0 213 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 CPA5Q8WXQ8 436 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 IRGQQ8WZA9 623 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 USP13Q92995 863 aaPredicted RBP7.77□□□□□ -1.17
LINC01049-201ENST00000426840 NXPE3Q969Y0 559 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 PPP1R13BQ96KQ4 1090 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 UHRF1Q96T88 793 aaPredicted RBP7.77□□□□□ -1.17
LINC01049-201ENST00000426840 MIS12Q9H081 205 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 SMG9Q9H0W8 520 aaKnown RBP7.77□□□□□ -1.17
LINC01049-201ENST00000426840 PDCL3Q9H2J4 239 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 HAUS4Q9H6D7 363 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 CCSER2Q9H7U1 834 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 ZFP14Q9HCL3 533 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 ST7Q9NRC1 585 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 TDP1Q9NUW8 608 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.77□□□□□ -1.17
LINC01049-201ENST00000426840 CLIC5Q9NZA1 410 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 SCHIP1Q9P0W5 487 aaPredicted RBP7.77□□□□□ -1.17
LINC01049-201ENST00000426840 IGSF9Q9P2J2 1179 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 ZMYM5Q9UJ78 669 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 NUDT5Q9UKK9 219 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 NUMBLQ9Y6R0 609 aa7.77□□□□□ -1.17
LINC01049-201ENST00000426840 TRAV19A0A0A6YYK7 116 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 FAM170AA1A519 330 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 HEPACAM2A8MVW5 462 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 DDX3XO00571 662 aaKnown RBP eCLIP7.76□□□□□ -1.17
LINC01049-201ENST00000426840 COCHO43405 550 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 TLR5O60602 858 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 FBXO21O94952 628 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 PRAMEF12O95522 483 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 ADCY5O95622 1261 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 SERPING1P05155 500 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 TCF3P15923 654 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 MMP8P22894 467 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 ATP5C1P36542 298 aaKnown RBP7.76□□□□□ -1.17
LINC01049-201ENST00000426840 TUBP50607 506 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 ADKP55263 362 aaKnown RBP7.76□□□□□ -1.17
LINC01049-201ENST00000426840 SLC7A9P82251 487 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 KLHL30Q0D2K2 578 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 ZNF268Q14587 947 aaPredicted RBP7.76□□□□□ -1.17
LINC01049-201ENST00000426840 TAF5Q15542 800 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 CLEC16AQ2KHT3 1053 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 C2CD6Q53TS8 623 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 NAA35Q5VZE5 725 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 ACAD10Q6JQN1 1059 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 KLHDC10Q6PID8 442 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 FOXR1Q6PIV2 292 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 VITQ6UXI7 678 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 TRIM72Q6ZMU5 477 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 MTSS1LQ765P7 747 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 BEND5Q7L4P6 421 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 ERICH1Q86X53 443 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 PHF13Q86YI8 300 aaPredicted RBP7.76□□□□□ -1.17
LINC01049-201ENST00000426840 MFSD6LQ8IWD5 586 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 SIX5Q8N196 739 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 SIX6OS1Q8N1H7 587 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 ARHGAP18Q8N392 663 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 CELF5Q8N6W0 485 aaKnown RBP7.76□□□□□ -1.17
LINC01049-201ENST00000426840 ELSPBP1Q96BH3 223 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 C18orf8Q96DM3 657 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 PIWIL1Q96J94 861 aaKnown RBP7.76□□□□□ -1.17
LINC01049-201ENST00000426840 DNAJC7Q99615 494 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 KXD1Q9BQD3 176 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 TSPAN10Q9H1Z9 355 aaPredicted RBP7.76□□□□□ -1.17
LINC01049-201ENST00000426840 SLITRK6Q9H5Y7 841 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 TRPC7Q9HCX4 862 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 GKN1Q9NS71 199 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 ABCC13Q9NSE7 274 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 OBP2AQ9NY56 170 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 TAS2R14Q9NYV8 317 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 ARHGAP20Q9P2F6 1191 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 NAGPAQ9UK23 515 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 ARHGAP26Q9UNA1 814 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 ZNF232Q9UNY5 417 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 CCL26Q9Y258 94 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 CEP83Q9Y592 693 aa7.76□□□□□ -1.17
LINC01049-201ENST00000426840 BZW2Q9Y6E2 419 aaKnown RBP7.76□□□□□ -1.17
LINC01049-201ENST00000426840 XIRP2A4UGR9 3374 aa7.75□□□□□ -1.17
LINC01049-201ENST00000426840 AKR1B15C9JRZ8 316 aaPredicted RBP7.75□□□□□ -1.17
LINC01049-201ENST00000426840 LEFTY2O00292 366 aa7.75□□□□□ -1.17
LINC01049-201ENST00000426840 MDM4O15151 490 aa7.75□□□□□ -1.17
LINC01049-201ENST00000426840 GREM1O60565 184 aa7.75□□□□□ -1.17
LINC01049-201ENST00000426840 MFAP3LO75121 409 aa7.75□□□□□ -1.17
LINC01049-201ENST00000426840 DKK1O94907 266 aa7.75□□□□□ -1.17
LINC01049-201ENST00000426840 LTFP02788 710 aa7.75□□□□□ -1.17
LINC01049-201ENST00000426840 THBS1P07996 1170 aa7.75□□□□□ -1.17
LINC01049-201ENST00000426840 PLEKP08567 350 aaPredicted RBP7.75□□□□□ -1.17
LINC01049-201ENST00000426840 MBL2P11226 248 aaPredicted RBP7.75□□□□□ -1.17
LINC01049-201ENST00000426840 RALAP11233 206 aa7.75□□□□□ -1.17
LINC01049-201ENST00000426840 CDC25BP30305 580 aa7.75□□□□□ -1.17
LINC01049-201ENST00000426840 AVPR1AP37288 418 aa7.75□□□□□ -1.17
LINC01049-201ENST00000426840 EPHA4P54764 986 aa7.75□□□□□ -1.17
LINC01049-201ENST00000426840 SNX16P57768 344 aa7.75□□□□□ -1.17
LINC01049-201ENST00000426840 YWHAZP63104 245 aaKnown RBP7.75□□□□□ -1.17
LINC01049-201ENST00000426840 GPC5P78333 572 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms