RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 SLC9C1Q4G0N8 1177 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 RAP1GAP2Q684P5 730 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 DPP9Q86TI2 863 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 SKAP1Q86WV1 359 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 P3H2Q8IVL5 708 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 CCDC150Q8NCX0 1101 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 PJA1Q8NG27 643 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 LRRC46Q96FV0 321 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 FCRL5Q96RD9 977 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 TRMOQ9BU70 441 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 WDR26Q9H7D7 661 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 GJB4Q9NTQ9 266 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 GEMIN8Q9NWZ8 242 aaKnown RBP4.7□□□□□ -1.66
LINC00397-201ENST00000422074 HEY2Q9UBP5 337 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 ANO9A1A5B4 782 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 C2CD4BA6NLJ0 364 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 PRYO14603 147 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 USP12O75317 370 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 FGF18O76093 207 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 CD63P08962 238 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 IDEP14735 1019 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 HOXA7P31268 230 aaPredicted RBP4.69□□□□□ -1.66
LINC00397-201ENST00000422074 ZNF84P51523 738 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 B4GALNT1Q00973 533 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 STIM1Q13586 685 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 CNGA3Q16281 694 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 MAPKAPK3Q16644 382 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 ARL13BQ3SXY8 428 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 TMEM196Q5HYL7 178 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 ACSM6Q6P461 480 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 RBM44Q6ZP01 1051 aaKnown RBP4.69□□□□□ -1.66
LINC00397-201ENST00000422074 ANKRD13BQ86YJ7 626 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.69□□□□□ -1.66
LINC00397-201ENST00000422074 CCDC33Q8N5R6 958 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 ARFGAP1Q8N6T3 406 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 GLMPQ8WWB7 406 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 GJA10Q969M2 543 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 TBCBQ99426 244 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 PCDHAC1Q9H158 963 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 RGL1Q9NZL6 768 aa4.69□□□□□ -1.66
LINC00397-201ENST00000422074 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.69□□□□□ -1.66
LINC00397-201ENST00000422074 SGPL1O95470 568 aa4.68□□□□□ -1.66
LINC00397-201ENST00000422074 RPS6KB1P23443 525 aa4.68□□□□□ -1.66
LINC00397-201ENST00000422074 IGHMBP2P38935 993 aaKnown RBP4.68□□□□□ -1.66
LINC00397-201ENST00000422074 NSUN2Q08J23 767 aaKnown RBP eCLIP4.68□□□□□ -1.66
LINC00397-201ENST00000422074 SEMA3BQ13214 749 aa4.68□□□□□ -1.66
LINC00397-201ENST00000422074 MTX1Q13505 466 aa4.68□□□□□ -1.66
LINC00397-201ENST00000422074 CCDC144NLQ6NUI1 221 aa4.68□□□□□ -1.66
LINC00397-201ENST00000422074 HIBCHQ6NVY1 386 aaPredicted RBP4.68□□□□□ -1.66
LINC00397-201ENST00000422074 PIK3AP1Q6ZUJ8 805 aa4.68□□□□□ -1.66
LINC00397-201ENST00000422074 RFX6Q8HWS3 928 aa4.68□□□□□ -1.66
LINC00397-201ENST00000422074 GLIS1Q8NBF1 620 aa4.68□□□□□ -1.66
LINC00397-201ENST00000422074 OR52L2PQ8NGH6 319 aa4.68□□□□□ -1.66
LINC00397-201ENST00000422074 ZNF845Q96IR2 970 aaPredicted RBP4.68□□□□□ -1.66
LINC00397-201ENST00000422074 SENP7Q9BQF6 1050 aa4.68□□□□□ -1.66
LINC00397-201ENST00000422074 WACQ9BTA9 647 aa4.68□□□□□ -1.66
LINC00397-201ENST00000422074 ARL8BQ9NVJ2 186 aa4.68□□□□□ -1.66
LINC00397-201ENST00000422074 CA14Q9ULX7 337 aa4.68□□□□□ -1.66
LINC00397-201ENST00000422074 MAN2B2Q9Y2E5 1009 aa4.68□□□□□ -1.66
LINC00397-201ENST00000422074 HEMK1Q9Y5R4 338 aaPredicted RBP4.68□□□□□ -1.66
LINC00397-201ENST00000422074 TTBK1Q5TCY1 1321 aaPredicted RBP4.68□□□□□ -1.66
LINC00397-201ENST00000422074 CCDC187A0A096LP49 1063 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 GXYLT2A0PJZ3 443 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 MYMKA6NI61 221 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 TTC34A8MYJ7 566 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 TRIM38O00635 465 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 PMM2O15305 246 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 INSIG1O15503 277 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 ZSCAN9O15535 394 aaPredicted RBP4.67□□□□□ -1.66
LINC00397-201ENST00000422074 CTIFO43310 598 aaKnown RBP4.67□□□□□ -1.66
LINC00397-201ENST00000422074 TLX3O43711 291 aaPredicted RBP4.67□□□□□ -1.66
LINC00397-201ENST00000422074 FGF2P09038 288 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 ME1P48163 572 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 SOX2P48431 317 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 LINC00205P59089 165 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 GAB1Q13480 694 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 ZNF260Q3ZCT1 412 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 KYAT3Q6YP21 454 aaKnown RBP4.67□□□□□ -1.66
LINC00397-201ENST00000422074 ZNF517Q6ZMY9 492 aaPredicted RBP4.67□□□□□ -1.66
LINC00397-201ENST00000422074 FAM57BQ71RH2 274 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 LAS2Q8IYD9 372 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 ASB12Q8WXK4 309 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 AKAP1Q92667 903 aaKnown RBP eCLIP4.67□□□□□ -1.66
LINC00397-201ENST00000422074 PAAF1Q9BRP4 392 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 KRTAP1-5Q9BYS1 174 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 CDCP1Q9H5V8 836 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 NECTIN3Q9NQS3 549 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 FAM50BQ9Y247 325 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 DTNAQ9Y4J8 743 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 PCDHB2Q9Y5E7 798 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 HS3ST3B1Q9Y662 390 aa4.67□□□□□ -1.66
LINC00397-201ENST00000422074 SLC22A23A1A5C7 686 aa4.66□□□□□ -1.66
LINC00397-201ENST00000422074 FAM90A10PA6NDY2 464 aa4.66□□□□□ -1.66
LINC00397-201ENST00000422074 RASA4BC9J798 803 aa4.66□□□□□ -1.66
LINC00397-201ENST00000422074 RASA4O43374 803 aa4.66□□□□□ -1.66
LINC00397-201ENST00000422074 NDST3O95803 873 aa4.66□□□□□ -1.66
LINC00397-201ENST00000422074 TOMM40O96008 361 aa4.66□□□□□ -1.66
LINC00397-201ENST00000422074 VIPP01282 170 aa4.66□□□□□ -1.66
LINC00397-201ENST00000422074 PECAM1P16284 738 aaPredicted RBP4.66□□□□□ -1.66
LINC00397-201ENST00000422074 DRD1P21728 446 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms