RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 SLC24A3Q9HC58 644 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 SF3B1O75533 1304 aaKnown RBP eCLIP8.69□□□□□ -1.029e-7■■■■■ 55.9
UBR4-206ENST00000419533 SALL3Q9BXA9 1300 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 MAGEB16A2A368 324 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 FKBP9O95302 570 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 FAM107AO95990 144 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 ENO1P06733 434 aaKnown RBP8.69□□□□□ -1.02
UBR4-206ENST00000419533 MSH3P20585 1137 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 PGM1P36871 562 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 MDH1P40925 334 aaKnown RBP8.69□□□□□ -1.02
UBR4-206ENST00000419533 MAPK7Q13164 816 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 PPIGQ13427 754 aaKnown RBP eCLIP8.69□□□□□ -1.021e-7■■□□□ 14
UBR4-206ENST00000419533 AASDHQ4L235 1098 aaPredicted RBP8.69□□□□□ -1.02
UBR4-206ENST00000419533 FKBP9P1Q75LS8 142 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 SUGP1Q8IWZ8 645 aaKnown RBP8.69□□□□□ -1.02
UBR4-206ENST00000419533 FAM162AQ96A26 154 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 TMA16Q96EY4 203 aaKnown RBP8.69□□□□□ -1.02
UBR4-206ENST00000419533 PNMA5Q96PV4 448 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 GAD1Q99259 594 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 KLC4Q9NSK0 619 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 DTNAQ9Y4J8 743 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 E2F8A0AVK6 867 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 PHF20L1A8MW92 1017 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 TRIM49D1C9J1S8 452 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 IGF2BP3O00425 579 aaKnown RBP eCLIP8.69□□□□□ -1.02
UBR4-206ENST00000419533 HNRNPRO43390 633 aaKnown RBP8.69□□□□□ -1.02
UBR4-206ENST00000419533 ATP5BP06576 529 aaKnown RBP8.69□□□□□ -1.02
UBR4-206ENST00000419533 CCL5P13501 91 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 OSCP1Q8WVF1 389 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 ZNF606Q8WXB4 792 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 TATDN2Q93075 761 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 KCNK16Q96T55 309 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 NPHS2Q9NP85 383 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 UBIAD1Q9Y5Z9 338 aa8.69□□□□□ -1.02
UBR4-206ENST00000419533 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.68□□□□□ -1.02
UBR4-206ENST00000419533 TSPAN3O60637 253 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 PGK1P00558 417 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 CNTFP26441 200 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 CTNNB1P35222 781 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 TUBP50607 506 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 SKOR1P84550 965 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 KDSRQ06136 332 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 ACTN3Q08043 901 aaPredicted RBP8.68□□□□□ -1.02
UBR4-206ENST00000419533 C2CD6Q53TS8 623 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 GJC2Q5T442 439 aaPredicted RBP8.68□□□□□ -1.02
UBR4-206ENST00000419533 ANKS6Q68DC2 871 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 NLRP9Q7RTR0 991 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 UNC93AQ86WB7 457 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 ZNF555Q8NEP9 628 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 LPCAT1Q8NF37 534 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 SLC2A14Q8TDB8 520 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 SENP8Q96LD8 212 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 CXorf56Q9H5V9 222 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 ABCC13Q9NSE7 274 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 RBM22Q9NW64 420 aaKnown RBP eCLIP8.68□□□□□ -1.021e-7■■■■■ 41.1
UBR4-206ENST00000419533 TNFSF13BQ9Y275 285 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.68□□□□□ -1.02
UBR4-206ENST00000419533 N4BP2Q86UW6 1770 aaPredicted RBP8.68□□□□□ -1.02
UBR4-206ENST00000419533 NUP188Q5SRE5 1749 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 DUSP11O75319 330 aaKnown RBP8.68□□□□□ -1.02
UBR4-206ENST00000419533 PLEKP08567 350 aaPredicted RBP8.68□□□□□ -1.02
UBR4-206ENST00000419533 POLR2EP19388 210 aaKnown RBP8.68□□□□□ -1.02
UBR4-206ENST00000419533 PTPN3P26045 913 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 PPM1AP35813 382 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 OCA2Q04671 838 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 FLOT2Q14254 428 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 FNDC3BQ53EP0 1204 aaKnown RBP8.68□□□□□ -1.02
UBR4-206ENST00000419533 DENND1BQ6P3S1 775 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 LVRNQ6Q4G3 990 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 LRRC6Q86X45 466 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 MCOLN2Q8IZK6 566 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 LGI2Q8N0V4 545 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 EMC1Q8N766 993 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 SERPINB12Q96P63 405 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 OSGEPL1Q9H4B0 414 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 MANSC1Q9H8J5 431 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 WDR41Q9HAD4 459 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 PRDM16Q9HAZ2 1276 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 IARS2Q9NSE4 1012 aaKnown RBP8.68□□□□□ -1.02
UBR4-206ENST00000419533 EVA1BQ9NVM1 165 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 SMPD4Q9NXE4 827 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 WHRNQ9P202 907 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 EIF4BP23588 611 aaKnown RBP8.68□□□□□ -1.02
UBR4-206ENST00000419533 NOMO2Q5JPE7 1267 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 PRAMEF19Q5SWL8 479 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 OLFML2BQ68BL8 750 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 CCDC60Q8IWA6 550 aaPredicted RBP8.68□□□□□ -1.02
UBR4-206ENST00000419533 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.68□□□□□ -1.02
UBR4-206ENST00000419533 PLEKHA8Q96JA3 519 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 DACH2Q96NX9 599 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 TSPAN18Q96SJ8 248 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 POPDC2Q9HBU9 364 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 FAM50BQ9Y247 325 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 TRAV19A0A0A6YYK7 116 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 MAFO75444 373 aaPredicted RBP8.68□□□□□ -1.02
UBR4-206ENST00000419533 TRIM16O95361 564 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 RBP1P09455 135 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 MLNP12872 115 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 MLH1P40692 756 aa8.68□□□□□ -1.02
UBR4-206ENST00000419533 CAPZA2P47755 286 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms