RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 DTX3LQ8TDB6 740 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 SNX29Q8TEQ0 813 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 SYN2Q92777 582 aaPredicted RBP5.39□□□□□ -1.55
HERC4-205ENST00000412272 ZNF668Q96K58 619 aaPredicted RBP5.39□□□□□ -1.55
HERC4-205ENST00000412272 YME1L1Q96TA2 773 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 NOC4LQ9BVI4 516 aaKnown RBP5.39□□□□□ -1.55
HERC4-205ENST00000412272 SLC4A5Q9BY07 1137 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 ZNF341Q9BYN7 854 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 MYLK2Q9H1R3 596 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 OR51B5Q9H339 312 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 CABP2Q9NPB3 220 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 IGSF9Q9P2J2 1179 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 THEGQ9P2T0 379 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 PLCH1Q4KWH8 1693 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 C15orf38-AP3S2A0A0A6YYH1 394 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 A0A0G2JMP0 313 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 ESYT3A0FGR9 886 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 DBX1A6NMT0 343 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 BTBD18B2RXH4 712 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 NBPF26B4DH59 902 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 DDX3XO00571 662 aaKnown RBP eCLIP5.39□□□□□ -1.55
HERC4-205ENST00000412272 PDPK1O15530 556 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 MSI1O43347 362 aaKnown RBP5.39□□□□□ -1.55
HERC4-205ENST00000412272 NUAK1O60285 661 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 ITGB1P05556 798 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 PGK2P07205 417 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 P4HBP07237 508 aaKnown RBP5.39□□□□□ -1.55
HERC4-205ENST00000412272 HMOX1P09601 288 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 UQCRBP14927 111 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 CCNE1P24864 410 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 PTPN4P29074 926 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 JAM2P57087 298 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 TARDBPQ13148 414 aaKnown RBP eCLIP5.39□□□□□ -1.55
HERC4-205ENST00000412272 MED21Q13503 144 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 PDK3Q15120 406 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 LTB4RQ15722 352 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 FOXR2Q6PJQ5 311 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 ARPINQ7Z6K5 226 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 VPS37DQ86XT2 251 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 IRF2BP1Q8IU81 584 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 RNF135Q8IUD6 432 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 SRBD1Q8N5C6 995 aaKnown RBP5.39□□□□□ -1.55
HERC4-205ENST00000412272 TRIB2Q92519 343 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 RAB7BQ96AH8 199 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 PBXIP1Q96AQ6 731 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 SELENOSQ9BQE4 189 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 STRN4Q9NRL3 753 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 LUZP4Q9P127 313 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 AGO1Q9UL18 857 aaKnown RBP5.39□□□□□ -1.55
HERC4-205ENST00000412272 PIAS3Q9Y6X2 628 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 ANKRD36CQ5JPF3 1778 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 A0A0X1KG70 313 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 ESYT2A0FGR8 921 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 E7EWF7 191 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 CACNB4O00305 520 aaPredicted RBP5.39□□□□□ -1.55
HERC4-205ENST00000412272 BRINP1O60477 761 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 DAB1O75553 588 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 GUCA1CO95843 209 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 THRAP10827 490 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 MYL4P12829 197 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 ITGALP20701 1170 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 SLC12A2P55011 1212 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 NPEPPSP55786 919 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 STX1BP61266 288 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 BEX3Q00994 111 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 TRADDQ15628 312 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 LRIT3Q3SXY7 679 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 METTL24Q5JXM2 366 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 RBM20Q5T481 1227 aaKnown RBP5.39□□□□□ -1.55
HERC4-205ENST00000412272 SWSAP1Q6NVH7 229 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 FBXL19Q6PCT2 694 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 DRICH1Q6PGQ1 229 aaPredicted RBP5.39□□□□□ -1.55
HERC4-205ENST00000412272 SUSD1Q6UWL2 747 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 TTC7BQ86TV6 843 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 NPAS4Q8IUM7 802 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 MAPKAPK5Q8IW41 473 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 SCUBE3Q8IX30 993 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 C12orf56Q8IXR9 622 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 SLC4A11Q8NBS3 891 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 TBC1D15Q8TC07 691 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 TGFBRAP1Q8WUH2 860 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 JPH3Q8WXH2 748 aaPredicted RBP5.39□□□□□ -1.55
HERC4-205ENST00000412272 SYMPKQ92797 1274 aaKnown RBP5.39□□□□□ -1.55
HERC4-205ENST00000412272 WNK4Q96J92 1243 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 MAGEB18Q96M61 343 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 BRINP2Q9C0B6 783 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 SMYD3Q9H7B4 428 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 SCUBE2Q9NQ36 999 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 GIMAP4Q9NUV9 329 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 ZNF624Q9P2J8 865 aaPredicted RBP5.39□□□□□ -1.55
HERC4-205ENST00000412272 CDH7Q9ULB5 785 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 DERAQ9Y315 318 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 ACTL7BQ9Y614 415 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 MARF1Q9Y4F3 1742 aaKnown RBP5.38□□□□□ -1.55
HERC4-205ENST00000412272 A0A1B0GTQ1 180 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 LRRC53A6NM62 1247 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 LAD1O00515 517 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 MTSS1O43312 755 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 COBLO75128 1261 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 CIAO1O76071 339 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms