RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 PEAR1Q5VY43 1037 aaPredicted RBP15.43■□□□□ 0.06
CBX3-203ENST00000409747 ANKS1BQ7Z6G8 1248 aa15.43■□□□□ 0.06
CBX3-203ENST00000409747 SCML4Q8N228 414 aa15.43■□□□□ 0.06
CBX3-203ENST00000409747 UBR7Q8N806 425 aa15.43■□□□□ 0.06
CBX3-203ENST00000409747 FRMD1Q8N878 549 aa15.43■□□□□ 0.06
CBX3-203ENST00000409747 SLC2A11Q9BYW1 496 aa15.43■□□□□ 0.06
CBX3-203ENST00000409747 CD248Q9HCU0 757 aa15.43■□□□□ 0.06
CBX3-203ENST00000409747 ANGPTL2Q9UKU9 493 aa15.43■□□□□ 0.06
CBX3-203ENST00000409747 TULP2O00295 520 aa15.42■□□□□ 0.06
CBX3-203ENST00000409747 IRX4P78413 519 aa15.42■□□□□ 0.06
CBX3-203ENST00000409747 TRIP4Q15650 581 aaPredicted RBP15.42■□□□□ 0.06
CBX3-203ENST00000409747 N4BP2L1Q5TBK1 243 aaPredicted RBP15.42■□□□□ 0.06
CBX3-203ENST00000409747 KLHL10Q6JEL2 608 aa15.42■□□□□ 0.06
CBX3-203ENST00000409747 TMEM270Q6UE05 265 aa15.42■□□□□ 0.06
CBX3-203ENST00000409747 LCLAT1Q6UWP7 414 aa15.42■□□□□ 0.06
CBX3-203ENST00000409747 FMNL3Q8IVF7 1028 aa15.42■□□□□ 0.06
CBX3-203ENST00000409747 FAM217AQ8IXS0 508 aa15.42■□□□□ 0.06
CBX3-203ENST00000409747 PPM1KQ8N3J5 372 aa15.42■□□□□ 0.06
CBX3-203ENST00000409747 ABCC13Q9NSE7 274 aa15.42■□□□□ 0.06
CBX3-203ENST00000409747 PILRBQ9UKJ0 227 aa15.42■□□□□ 0.06
CBX3-203ENST00000409747 IGHV1OR15-9A0A0B4J2B8 117 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 LATS1O95835 1130 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 GNA14O95837 355 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 PMLP29590 882 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 NOVA1P51513 510 aaKnown RBP15.41■□□□□ 0.06
CBX3-203ENST00000409747 MPPE1Q53F39 396 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 BSPRYQ5W0U4 402 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 ISM2Q6H9L7 571 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 PSAPL1Q6NUJ1 521 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 KIAA1211LQ6NV74 962 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 TTI2Q6NXR4 508 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 SLC23A3Q6PIS1 610 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 BHLHA9Q7RTU4 235 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 UBA3Q8TBC4 463 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 DDI1Q8WTU0 396 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 NELFBQ8WX92 580 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 PCDHB4Q9Y5E5 795 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 RAD54BQ9Y620 910 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 STON1Q9Y6Q2 735 aa15.41■□□□□ 0.06
CBX3-203ENST00000409747 CNOT1A5YKK6 2376 aaKnown RBP15.4■□□□□ 0.06
CBX3-203ENST00000409747 NDUFS2O75306 463 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 CD44P16070 742 aaKnown RBP15.4■□□□□ 0.06
CBX3-203ENST00000409747 ITPKAP23677 461 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 GCNT1Q02742 428 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 ZNF33AQ06730 810 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 GEN1Q17RS7 908 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 DUOXA1Q1HG43 343 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 PKDCCQ504Y2 493 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 IRGQQ8WZA9 623 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 GOLGA1Q92805 767 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 MRGPRX1Q96LB2 322 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 TMEM74BQ9NUR3 256 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 THAP10Q9P2Z0 257 aaPredicted RBP15.4■□□□□ 0.06
CBX3-203ENST00000409747 CYP8B1Q9UNU6 501 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 CEP192Q8TEP8 1941 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 ATXN2Q99700 1313 aaKnown RBP15.4■□□□□ 0.06
CBX3-203ENST00000409747 YJEFN3A6XGL0 299 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 E7ENQ6 273 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 CDX4O14627 284 aaPredicted RBP15.4■□□□□ 0.06
CBX3-203ENST00000409747 TIMM44O43615 452 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 SYNCRIPO60506 623 aaKnown RBP15.4■□□□□ 0.06
CBX3-203ENST00000409747 CFIP05156 583 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 CSRP1P21291 193 aaKnown RBP15.4■□□□□ 0.06
CBX3-203ENST00000409747 ATXN3P54252 364 aaPredicted RBP15.4■□□□□ 0.06
CBX3-203ENST00000409747 DAOAP59103 153 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 SHC2P98077 582 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 ARID5AQ03989 594 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 ENPP2Q13822 863 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 CNGA2Q16280 664 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 KIAA1324Q6UXG2 1013 aaKnown RBP15.4■□□□□ 0.06
CBX3-203ENST00000409747 METTL3Q86U44 580 aaKnown RBP15.4■□□□□ 0.06
CBX3-203ENST00000409747 NDRG1Q92597 394 aaKnown RBP15.4■□□□□ 0.06
CBX3-203ENST00000409747 EDEM1Q92611 657 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 PIWIL1Q96J94 861 aaKnown RBP15.4■□□□□ 0.06
CBX3-203ENST00000409747 ELOVL2Q9NXB9 296 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 STOML2Q9UJZ1 356 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 SLC6A14Q9UN76 642 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.4■□□□□ 0.06
CBX3-203ENST00000409747 CTNND2Q9UQB3 1225 aa15.4■□□□□ 0.06
CBX3-203ENST00000409747 ACACBO00763 2458 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 M0QYV0 167 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 CEACAM1P13688 526 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 LCP1P13796 627 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 ENGP17813 658 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 GFPT1Q06210 699 aaPredicted RBP15.39■□□□□ 0.05
CBX3-203ENST00000409747 PAK1Q13153 545 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 MORC3Q14149 939 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 FUT11Q495W5 492 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 SYCP2LQ5T4T6 812 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 SH3PXD2AQ5TCZ1 1133 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 SLC35F5Q8WV83 523 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 FOXJ1Q92949 421 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 P2RY11Q96G91 374 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 HSFY1Q96LI6 401 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 IRX2Q9BZI1 471 aaPredicted RBP15.39■□□□□ 0.05
CBX3-203ENST00000409747 CIPCQ9C0C6 399 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 PRDM16Q9HAZ2 1276 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 SUSD2Q9UGT4 822 aa15.39■□□□□ 0.05
CBX3-203ENST00000409747 PPP1R3GB7ZBB8 358 aa15.38■□□□□ 0.05
CBX3-203ENST00000409747 WASH3PC4AMC7 463 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms