RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 CCDC130P13994 396 aa20.72■□□□□ 0.91
UPK3B-203ENST00000394849 BNC1Q01954 994 aa20.72■□□□□ 0.91
UPK3B-203ENST00000394849 C19orf57Q0VDD7 668 aa20.72■□□□□ 0.91
UPK3B-203ENST00000394849 PKP1Q13835 747 aa20.72■□□□□ 0.91
UPK3B-203ENST00000394849 SMAD1Q15797 465 aaKnown RBP20.72■□□□□ 0.91
UPK3B-203ENST00000394849 ANKS1BQ7Z6G8 1248 aa20.72■□□□□ 0.91
UPK3B-203ENST00000394849 COL26A1Q96A83 441 aa20.72■□□□□ 0.91
UPK3B-203ENST00000394849 SLC2A11Q9BYW1 496 aa20.72■□□□□ 0.91
UPK3B-203ENST00000394849 DNAI2Q9GZS0 605 aa20.72■□□□□ 0.91
UPK3B-203ENST00000394849 OSER1Q9NX31 292 aa20.72■□□□□ 0.91
UPK3B-203ENST00000394849 ELOVL2Q9NXB9 296 aa20.72■□□□□ 0.91
UPK3B-203ENST00000394849 TFIP11Q9UBB9 837 aaKnown RBP20.72■□□□□ 0.91
UPK3B-203ENST00000394849 BPTFQ12830 3046 aa20.72■□□□□ 0.91
UPK3B-203ENST00000394849 A0A1B0GVT2 93 aa20.71■□□□□ 0.91
UPK3B-203ENST00000394849 CYP26A1O43174 497 aa20.71■□□□□ 0.91
UPK3B-203ENST00000394849 PCDHGA12O60330 932 aa20.71■□□□□ 0.91
UPK3B-203ENST00000394849 DFNA5O60443 496 aa20.71■□□□□ 0.91
UPK3B-203ENST00000394849 STC2O76061 302 aa20.71■□□□□ 0.91
UPK3B-203ENST00000394849 CYBBP04839 570 aa20.71■□□□□ 0.91
UPK3B-203ENST00000394849 RALAP11233 206 aa20.71■□□□□ 0.91
UPK3B-203ENST00000394849 NASPP49321 788 aaPredicted RBP20.71■□□□□ 0.91
UPK3B-203ENST00000394849 CAMK2BQ13554 666 aa20.71■□□□□ 0.91
UPK3B-203ENST00000394849 GEN1Q17RS7 908 aa20.71■□□□□ 0.91
UPK3B-203ENST00000394849 FYB2Q5VWT5 728 aa20.71■□□□□ 0.91
UPK3B-203ENST00000394849 SCARA5Q6ZMJ2 495 aa20.71■□□□□ 0.91
UPK3B-203ENST00000394849 IGSF8Q969P0 613 aa20.71■□□□□ 0.91
UPK3B-203ENST00000394849 HNRNPABQ99729 332 aaKnown RBP20.71■□□□□ 0.91
UPK3B-203ENST00000394849 CLIC5Q9NZA1 410 aa20.71■□□□□ 0.91
UPK3B-203ENST00000394849 KALRNO60229 2985 aa20.7■□□□□ 0.9
UPK3B-203ENST00000394849 C7P10643 843 aa20.7■□□□□ 0.9
UPK3B-203ENST00000394849 CDK4P11802 303 aa20.7■□□□□ 0.9
UPK3B-203ENST00000394849 GRIA4P48058 902 aa20.7■□□□□ 0.9
UPK3B-203ENST00000394849 CSNK1EP49674 416 aaKnown RBP20.7■□□□□ 0.9
UPK3B-203ENST00000394849 NDST1P52848 882 aa20.7■□□□□ 0.9
UPK3B-203ENST00000394849 COPAP53621 1224 aa20.7■□□□□ 0.9
UPK3B-203ENST00000394849 ARID5AQ03989 594 aa20.7■□□□□ 0.9
UPK3B-203ENST00000394849 ZNF234Q14588 700 aa20.7■□□□□ 0.9
UPK3B-203ENST00000394849 PTPRNQ16849 979 aa20.7■□□□□ 0.9
UPK3B-203ENST00000394849 NELFCDQ8IXH7 590 aa20.7■□□□□ 0.9
UPK3B-203ENST00000394849 IQUBQ8NA54 791 aa20.7■□□□□ 0.9
UPK3B-203ENST00000394849 PARD3BQ8TEW8 1205 aa20.7■□□□□ 0.9
UPK3B-203ENST00000394849 PIWIL1Q96J94 861 aaKnown RBP20.7■□□□□ 0.9
UPK3B-203ENST00000394849 SDCBP2Q9H190 292 aa20.7■□□□□ 0.9
UPK3B-203ENST00000394849 MAGEF1Q9HAY2 307 aa20.7■□□□□ 0.9
UPK3B-203ENST00000394849 NAGPAQ9UK23 515 aa20.7■□□□□ 0.9
UPK3B-203ENST00000394849 SHROOM3Q8TF72 1996 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 A0A1W2PQH9 124 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 C4BPAP04003 597 aaKnown RBP20.69■□□□□ 0.9
UPK3B-203ENST00000394849 ABCG1P45844 678 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 CCT8P50990 548 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 E2F4Q16254 413 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 KNOP1Q1ED39 458 aaKnown RBP20.69■□□□□ 0.9
UPK3B-203ENST00000394849 KIF19Q2TAC6 998 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 SERPINA13PQ6UXR4 307 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 CLEC20AQ6ZU45 233 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 UNC13DQ70J99 1090 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 CCDC186Q7Z3E2 898 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 TMPRSS12Q86WS5 348 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 LINC00301Q8NCQ3 95 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 C7orf25Q9BPX7 421 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 FBRSQ9HAH7 460 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 NMUR1Q9HB89 426 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 FAM49BQ9NUQ9 324 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.69■□□□□ 0.9
UPK3B-203ENST00000394849 ANKRD6Q9Y2G4 727 aa20.69■□□□□ 0.9
UPK3B-203ENST00000394849 GOLGA8CPA6NN73 597 aa20.68■□□□□ 0.9
UPK3B-203ENST00000394849 HHLA1C9JL84 531 aa20.68■□□□□ 0.9
UPK3B-203ENST00000394849 SPTLC2O15270 562 aa20.68■□□□□ 0.9
UPK3B-203ENST00000394849 YEATS4O95619 227 aa20.68■□□□□ 0.9
UPK3B-203ENST00000394849 EPHX1P07099 455 aa20.68■□□□□ 0.9
UPK3B-203ENST00000394849 HLA-EP13747 358 aa20.68■□□□□ 0.9
UPK3B-203ENST00000394849 KIF11P52732 1056 aa20.68■□□□□ 0.9
UPK3B-203ENST00000394849 EHHADHQ08426 723 aa20.68■□□□□ 0.9
UPK3B-203ENST00000394849 GPRIN1Q7Z2K8 1008 aa20.68■□□□□ 0.9
UPK3B-203ENST00000394849 CPXM2Q8N436 756 aa20.68■□□□□ 0.9
UPK3B-203ENST00000394849 C12orf29Q8N999 325 aa20.68■□□□□ 0.9
UPK3B-203ENST00000394849 LSM14AQ8ND56 463 aaKnown RBP20.68■□□□□ 0.9
UPK3B-203ENST00000394849 OR2T3Q8NH03 318 aa20.68■□□□□ 0.9
UPK3B-203ENST00000394849 TMEM174Q8WUU8 243 aa20.68■□□□□ 0.9
UPK3B-203ENST00000394849 SNX19Q92543 992 aa20.68■□□□□ 0.9
UPK3B-203ENST00000394849 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.68■□□□□ 0.9
UPK3B-203ENST00000394849 LRRIQ3A6PVS8 624 aaPredicted RBP20.67■□□□□ 0.9
UPK3B-203ENST00000394849 MDM4O15151 490 aa20.67■□□□□ 0.9
UPK3B-203ENST00000394849 PAPSS1O43252 624 aaPredicted RBP20.67■□□□□ 0.9
UPK3B-203ENST00000394849 KLKB1P03952 638 aa20.67■□□□□ 0.9
UPK3B-203ENST00000394849 ADORA2BP29275 332 aa20.67■□□□□ 0.9
UPK3B-203ENST00000394849 CASP4P49662 377 aa20.67■□□□□ 0.9
UPK3B-203ENST00000394849 ZBTB16Q05516 673 aa20.67■□□□□ 0.9
UPK3B-203ENST00000394849 PDE4CQ08493 712 aa20.67■□□□□ 0.9
UPK3B-203ENST00000394849 CAMK2GQ13555 558 aaPredicted RBP20.67■□□□□ 0.9
UPK3B-203ENST00000394849 ATL3Q6DD88 541 aa20.67■□□□□ 0.9
UPK3B-203ENST00000394849 ADAM32Q8TC27 787 aa20.67■□□□□ 0.9
UPK3B-203ENST00000394849 NXPE2Q96DL1 559 aa20.67■□□□□ 0.9
UPK3B-203ENST00000394849 CYFIP2Q96F07 1278 aa20.67■□□□□ 0.9
UPK3B-203ENST00000394849 CIPCQ9C0C6 399 aa20.67■□□□□ 0.9
UPK3B-203ENST00000394849 LHX5Q9H2C1 402 aa20.67■□□□□ 0.9
UPK3B-203ENST00000394849 NUDT5Q9UKK9 219 aa20.67■□□□□ 0.9
UPK3B-203ENST00000394849 CFAP45Q9UL16 551 aa20.67■□□□□ 0.9
UPK3B-203ENST00000394849 BTBD3Q9Y2F9 522 aa20.67■□□□□ 0.9
UPK3B-203ENST00000394849 PCDHGA1Q9Y5H4 931 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms