RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 CCDC50Q8IVM0 306 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 RCOR2Q8IZ40 523 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 GCNAQ96QF7 691 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 NACA2Q9H009 215 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 RNF38Q9H0F5 515 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 ATXN3LQ9H3M9 355 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 L2HGDHQ9H9P8 463 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 TRPC7Q9HCX4 862 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 DNMT3LQ9UJW3 386 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 TLR6Q9Y2C9 796 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 I6L893 689 aaPredicted RBP25.22■■□□□ 1.63
LRFN4-202ENST00000393952 LINC01565O15544 149 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 CD48P09326 243 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 ADRA1BP35368 520 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 TBX4P57082 545 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 NTHL1P78549 312 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 LLGL1Q15334 1064 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 TRIP4Q15650 581 aaPredicted RBP25.22■■□□□ 1.63
LRFN4-202ENST00000393952 ODF2Q5BJF6 829 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 TXNDC8Q6A555 127 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 KLHDC10Q6PID8 442 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 ANKS1BQ7Z6G8 1248 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 EFHBQ8N7U6 833 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 MRPS31Q92665 395 aaKnown RBP25.22■■□□□ 1.63
LRFN4-202ENST00000393952 NTAN1Q96AB6 310 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 SLC39A13Q96H72 371 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 RBM41Q96IZ5 413 aaKnown RBP25.22■■□□□ 1.63
LRFN4-202ENST00000393952 FCRL2Q96LA5 508 aaPredicted RBP25.22■■□□□ 1.63
LRFN4-202ENST00000393952 TKTL2Q9H0I9 626 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 DHX35Q9H5Z1 703 aaKnown RBP25.22■■□□□ 1.63
LRFN4-202ENST00000393952 SFXN1Q9H9B4 322 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 DZANK1Q9NVP4 752 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 LMCD1Q9NZU5 365 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 C3orf70A6NLC5 250 aaPredicted RBP25.21■■□□□ 1.63
LRFN4-202ENST00000393952 PDE2AO00408 941 aaPredicted RBP25.21■■□□□ 1.63
LRFN4-202ENST00000393952 KDELR1P24390 212 aa25.21■■□□□ 1.63
LRFN4-202ENST00000393952 ARSEP51690 589 aa25.21■■□□□ 1.63
LRFN4-202ENST00000393952 NNTQ13423 1086 aa25.21■■□□□ 1.63
LRFN4-202ENST00000393952 WHAMMP3Q1A5X7 153 aa25.21■■□□□ 1.63
LRFN4-202ENST00000393952 BRMS1LQ5PSV4 323 aa25.21■■□□□ 1.63
LRFN4-202ENST00000393952 TMC5Q6UXY8 1006 aa25.21■■□□□ 1.63
LRFN4-202ENST00000393952 SPOCD1Q6ZMY3 1216 aa25.21■■□□□ 1.63
LRFN4-202ENST00000393952 PDZD4Q76G19 769 aaPredicted RBP25.21■■□□□ 1.63
LRFN4-202ENST00000393952 GRASPQ7Z6J2 395 aaPredicted RBP25.21■■□□□ 1.63
LRFN4-202ENST00000393952 RASGEF1CQ8N431 466 aa25.21■■□□□ 1.63
LRFN4-202ENST00000393952 KCTD6Q8NC69 237 aa25.21■■□□□ 1.63
LRFN4-202ENST00000393952 SHKBP1Q8TBC3 707 aa25.21■■□□□ 1.63
LRFN4-202ENST00000393952 SMG7Q92540 1137 aaKnown RBP25.21■■□□□ 1.63
LRFN4-202ENST00000393952 TCEAL4Q96EI5 215 aa25.21■■□□□ 1.63
LRFN4-202ENST00000393952 HMBSP08397 361 aa25.2■■□□□ 1.62
LRFN4-202ENST00000393952 CCR1P32246 355 aa25.2■■□□□ 1.62
LRFN4-202ENST00000393952 CDH6P55285 790 aa25.2■■□□□ 1.62
LRFN4-202ENST00000393952 SCAPQ12770 1279 aa25.2■■□□□ 1.62
LRFN4-202ENST00000393952 PPP2R5DQ14738 602 aa25.2■■□□□ 1.62
LRFN4-202ENST00000393952 EFHC2Q5JST6 749 aa25.2■■□□□ 1.62
LRFN4-202ENST00000393952 PRPF38BQ5VTL8 546 aaKnown RBP25.2■■□□□ 1.62
LRFN4-202ENST00000393952 PYROXD2Q8N2H3 581 aa25.2■■□□□ 1.62
LRFN4-202ENST00000393952 SLC22A12Q96S37 553 aa25.2■■□□□ 1.62
LRFN4-202ENST00000393952 KCTD15Q96SI1 283 aaPredicted RBP25.2■■□□□ 1.62
LRFN4-202ENST00000393952 ARHGEF38Q9NXL2 777 aa25.2■■□□□ 1.62
LRFN4-202ENST00000393952 MOSPD3O75425 235 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 PAPLNO95428 1278 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 FGF19O95750 216 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 L1CAMP32004 1257 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 AIF1P55008 147 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 ADGRE1Q14246 886 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 KRT81Q14533 505 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 SLC5A9Q2M3M2 681 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 ARL13BQ3SXY8 428 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 STXBP5Q5T5C0 1151 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 CCDC181Q5TID7 509 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 TMEM184AQ6ZMB5 413 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 PSTKQ8IV42 348 aaKnown RBP25.19■■□□□ 1.62
LRFN4-202ENST00000393952 ARL14EPQ8N8R7 260 aaPredicted RBP25.19■■□□□ 1.62
LRFN4-202ENST00000393952 LEMD2Q8NC56 503 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 LRCH3Q96II8 777 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 CYP2S1Q96SQ9 504 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 HERPUD2Q9BSE4 406 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 PIDD1Q9HB75 910 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 PCDH18Q9HCL0 1135 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 MTMR10Q9NXD2 777 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 MTCH2Q9Y6C9 303 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 C2orf16Q68DN1 1984 aa25.19■■□□□ 1.62
LRFN4-202ENST00000393952 PGRMC1O00264 195 aaKnown RBP25.18■■□□□ 1.62
LRFN4-202ENST00000393952 IGLV3-27P01718 113 aa25.18■■□□□ 1.62
LRFN4-202ENST00000393952 FGGP02679 453 aa25.18■■□□□ 1.62
LRFN4-202ENST00000393952 DPYSL2Q16555 572 aa25.18■■□□□ 1.62
LRFN4-202ENST00000393952 PPP6R3Q5H9R7 873 aaPredicted RBP25.18■■□□□ 1.62
LRFN4-202ENST00000393952 RARS2Q5T160 578 aaKnown RBP25.18■■□□□ 1.62
LRFN4-202ENST00000393952 ACTRT1Q8TDG2 376 aa25.18■■□□□ 1.62
LRFN4-202ENST00000393952 CALN1Q9BXU9 219 aa25.18■■□□□ 1.62
LRFN4-202ENST00000393952 OSBPL8Q9BZF1 889 aa25.18■■□□□ 1.62
LRFN4-202ENST00000393952 TMEM51Q9NW97 253 aa25.18■■□□□ 1.62
LRFN4-202ENST00000393952 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.18■■□□□ 1.62
LRFN4-202ENST00000393952 TTC7AQ9ULT0 858 aaPredicted RBP25.18■■□□□ 1.62
LRFN4-202ENST00000393952 HBS1LQ9Y450 684 aaKnown RBP25.18■■□□□ 1.62
LRFN4-202ENST00000393952 SNX10Q9Y5X0 201 aa25.18■■□□□ 1.62
LRFN4-202ENST00000393952 KCNU1A8MYU2 1149 aa25.18■■□□□ 1.62
LRFN4-202ENST00000393952 OLFM2O95897 454 aa25.18■■□□□ 1.62
LRFN4-202ENST00000393952 MOCS2O96007 188 aaPredicted RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms