RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 GP6Q9HCN6 339 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 PAPOLBQ9NRJ5 636 aaKnown RBP7.85□□□□□ -1.15
TRBV28-201ENST00000390400 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.85□□□□□ -1.15
TRBV28-201ENST00000390400 INTUQ9ULD6 942 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 CTNND2Q9UQB3 1225 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 NOC2LQ9Y3T9 749 aaKnown RBP7.85□□□□□ -1.15
TRBV28-201ENST00000390400 ASB3Q9Y575 518 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 NFS1Q9Y697 457 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 SQORQ9Y6N5 450 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 ZMYM2Q9UBW7 1377 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 UMODL1Q5DID0 1318 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 TRIM43BA6NCK2 446 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 B4GALT5O43286 388 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 CALUO43852 315 aaPredicted RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 TSPAN1O60635 241 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 SUN1O94901 812 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 TIMP1P01033 207 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 KRT14P02533 472 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 PDGFRBP09619 1106 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 IQCF3P0C7M6 154 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 NQO1P15559 274 aaKnown RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 ARF4P18085 180 aaPredicted RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 FGFR4P22455 802 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 CCNE1P24864 410 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 AXLP30530 894 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 CD52P31358 61 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 RFC2P35250 354 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 HOXD13P35453 343 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 MATR3P43243 847 aaKnown RBP eCLIP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 MMP13P45452 471 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 RASSF2P50749 326 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 CCL23P55773 120 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 SNRPFP62306 86 aaKnown RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 RAC1P63000 192 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 C2orf54Q08AI8 447 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 CUL3Q13618 768 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 AUHQ13825 339 aaKnown RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 LPIN1Q14693 890 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 PPP1R7Q15435 360 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 GSTA3Q16772 222 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 GALNTL6Q49A17 601 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 ZC3H12BQ5HYM0 836 aaKnown RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 ATF7IP2Q5U623 682 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 IRGCQ6NXR0 463 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 NOTUMQ6P988 496 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 ZPBP2Q6X784 338 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 EP400NLQ6ZTU2 488 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 BVESQ8NE79 360 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 BTN2A2Q8WVV5 523 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 TRIM43Q96BQ3 446 aaPredicted RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 ZNF317Q96PQ6 595 aaPredicted RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 XPO6Q96QU8 1125 aaKnown RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 UBL7Q96S82 380 aaPredicted RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 CHP1Q99653 195 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 CDC6Q99741 560 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 MIPEPQ99797 713 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 ACO2Q99798 780 aaKnown RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 MKRN2Q9H000 416 aaKnown RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 MRPL18Q9H0U6 180 aaKnown RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 WNT8AQ9H1J5 351 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 VCX3BQ9H321 246 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 KCTD10Q9H3F6 313 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 AGO3Q9H9G7 860 aaKnown RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 PIDD1Q9HB75 910 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 TRIM39Q9HCM9 518 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 ERVK-5Q9HDB9 667 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 VCX3AQ9NNX9 186 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 SSU72Q9NP77 194 aaKnown RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 ARHGEF3Q9NR81 526 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 AGPAT5Q9NUQ2 364 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 TYW1Q9NV66 732 aaKnown RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 AIPL1Q9NZN9 384 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 ANKFY1Q9P2R3 1169 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 TMCO1Q9UM00 188 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 G3BP2Q9UN86 482 aaKnown RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 ST3GAL5Q9UNP4 418 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 PIN4Q9Y237 131 aaKnown RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 EMC9Q9Y3B6 208 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 PCDHA13Q9Y5I0 950 aa7.84□□□□□ -1.15
TRBV28-201ENST00000390400 BZW2Q9Y6E2 419 aaKnown RBP7.84□□□□□ -1.15
TRBV28-201ENST00000390400 A0A0A6YYK5 440 aaPredicted RBP7.83□□□□□ -1.16
TRBV28-201ENST00000390400 PDXKO00764 312 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 DLX3O60479 287 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 NBNO60934 754 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 TOM1L1O75674 476 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 NR3C1P04150 777 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 EDN1P05305 212 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 FGFR1P11362 822 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 CCNB1P14635 433 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 RAB6AP20340 208 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 ATP6V1C1P21283 382 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 RPL13P26373 211 aaKnown RBP7.83□□□□□ -1.16
TRBV28-201ENST00000390400 ALDH3A1P30838 453 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 CTNNA1P35221 906 aaKnown RBP7.83□□□□□ -1.16
TRBV28-201ENST00000390400 KIF11P52732 1056 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 STX17P56962 302 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 LRRC63Q05C16 580 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 MYO1EQ12965 1108 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 MBTPS1Q14703 1052 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms