RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 ZNF569Q5MCW4 686 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 RINT1Q6NUQ1 792 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 OSR1Q8TAX0 266 aaPredicted RBP3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 FAM71BQ8TC56 605 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 POF1BQ8WVV4 589 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 CUL5Q93034 780 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 C18orf8Q96DM3 657 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 C5orf34Q96MH7 638 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 FAM118BQ9BPY3 351 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 TP63Q9H3D4 680 aaPredicted RBP3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 EPS8L2Q9H6S3 715 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 SAP30LQ9HAJ7 183 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 TAGLN3Q9UI15 199 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 VPS4AQ9UN37 437 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 PCDHB7Q9Y5E2 793 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 WDR17Q8IZU2 1322 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 hCG_1642624A0A1W2PR95 340 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 OVOL3O00110 214 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 SYT5O00445 386 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 PCDH17O14917 1159 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 CTIFO43310 598 aaKnown RBP3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 ASNA1O43681 348 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 PRAMEF2O60811 474 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 PEX14O75381 377 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 ANXA6P08133 673 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 ITGA5P08648 1049 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 CD63P08962 238 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 EPHB2P29323 1055 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 SLC8A1P32418 973 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 IL6STP40189 918 aaPredicted RBP3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 PTK2BQ14289 1009 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 ELF2Q15723 593 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 PFKFB4Q16877 469 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 FAM110CQ1W6H9 321 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 CCDC38Q502W7 563 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 ZNF782Q6ZMW2 699 aaPredicted RBP3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 ZNF575Q86XF7 245 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 CNGA4Q8IV77 575 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 UEVLDQ8IX04 471 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 GALNT16Q8N428 558 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 C8orf58Q8NAV2 365 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 ADPRHL1Q8NDY3 354 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 SRFBP1Q8NEF9 429 aaKnown RBP3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 AKAP1Q92667 903 aaKnown RBP eCLIP3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 RSC1A1Q92681 617 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 EFHD1Q9BUP0 239 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 NUAK2Q9H093 628 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 OBP2BQ9NPH6 170 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 ABHD10Q9NUJ1 306 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 LRFN1Q9P244 771 aa3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 HEMK1Q9Y5R4 338 aaPredicted RBP3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 SIRT4Q9Y6E7 314 aaPredicted RBP3.8□□□□□ -1.8
RNU6-39P-201ENST00000384344 CCDC187A0A096LP49 1063 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 AQP12BA6NM10 295 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 LGALS16A8MUM7 142 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 EFCAB8A8MWE9 144 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 FCHO1O14526 889 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 TAF5LO75529 589 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 LARGE1O95461 756 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 LDHAP00338 332 aaKnown RBP3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 CSTBP04080 98 aaKnown RBP3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 NHLRC4P0CG21 123 aaPredicted RBP3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 CDK4P11802 303 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 KELP23276 732 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 VPS41P49754 854 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 SLC14A1Q13336 389 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 FHL3Q13643 280 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 WDR93Q6P2C0 686 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 ACSM6Q6P461 480 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 KLHL17Q6TDP4 642 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 PIK3AP1Q6ZUJ8 805 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 TRABD2AQ86V40 505 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 CCDC117Q8IWD4 279 aaPredicted RBP3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 ATG16L2Q8NAA4 619 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 GLMPQ8WWB7 406 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 DPF1Q92782 380 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 REXO5Q96IC2 774 aaKnown RBP3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 RMDN3Q96TC7 470 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 SENP7Q9BQF6 1050 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 PAGR1Q9BTK6 254 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 KATNAL1Q9BW62 490 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 CDCP1Q9H5V8 836 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 ASNSD1Q9NWL6 643 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 DACT1Q9NYF0 836 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 IGSF9Q9P2J2 1179 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 HERC5Q9UII4 1024 aaKnown RBP3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 FRMD4BQ9Y2L6 1034 aa3.79□□□□□ -1.8
RNU6-39P-201ENST00000384344 GXYLT2A0PJZ3 443 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 C3orf70A6NLC5 250 aaPredicted RBP3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 DNPH1O43598 174 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 CELA2AP08217 269 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 ALADP13716 330 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 NDUFS1P28331 727 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 MPGP29372 298 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 PDIA3P30101 505 aaKnown RBP3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 THBS4P35443 961 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 HSF1Q00613 529 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 GHRHRQ02643 423 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 TRIM14Q14142 442 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 GRM4Q14833 912 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 352.8 ms