RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 RBAK-RBAKDNI3L0D1 243 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 RECQL4O94761 1208 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 CYBBP04839 570 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 SERPINE1P05121 402 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 IFNA8P32881 189 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 TBL3Q12788 808 aaKnown RBP17.62■□□□□ 0.41
SGCB-201ENST00000381431 DDX39BQ13838 428 aaKnown RBP17.62■□□□□ 0.41
SGCB-201ENST00000381431 PTK2BQ14289 1009 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 NBPF20Q3BBV1 942 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 NETO2Q8NC67 525 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 CATSPER2Q96P56 530 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 ECSITQ9BQ95 431 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 UBE2OQ9C0C9 1292 aaKnown RBP17.62■□□□□ 0.41
SGCB-201ENST00000381431 THAP1Q9NVV9 213 aa17.62■□□□□ 0.41
SGCB-201ENST00000381431 R3HDM2Q9Y2K5 976 aaKnown RBP17.62■□□□□ 0.41
SGCB-201ENST00000381431 A0A0B4J269 797 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 B4GALT5O43286 388 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 TRIM13O60858 407 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 SOAT2O75908 522 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 SLC2A3P11169 496 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 ADORA2AP29274 412 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 FKBP1AP62942 108 aaKnown RBP17.61■□□□□ 0.41
SGCB-201ENST00000381431 TRMT5Q32P41 509 aaKnown RBP17.61■□□□□ 0.41
SGCB-201ENST00000381431 MAP1SQ66K74 1059 aaPredicted RBP17.61■□□□□ 0.41
SGCB-201ENST00000381431 STKLD1Q8NE28 680 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 APBA2Q99767 749 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 CINPQ9BW66 212 aaPredicted RBP17.61■□□□□ 0.41
SGCB-201ENST00000381431 NEUROG2Q9H2A3 272 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 SCHIP1Q9P0W5 487 aaPredicted RBP17.61■□□□□ 0.41
SGCB-201ENST00000381431 SLC12A8A0AV02 714 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 DCDC2CA8MYV0 355 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 ERVK-10P10266 1014 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 TGFB2P61812 414 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 KPNB1Q14974 876 aaKnown RBP17.61■□□□□ 0.41
SGCB-201ENST00000381431 QPCTQ16769 361 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 OLFML2BQ68BL8 750 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 FOXR2Q6PJQ5 311 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 RIC8BQ9NVN3 520 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 TRMT6Q9UJA5 497 aaKnown RBP17.61■□□□□ 0.41
SGCB-201ENST00000381431 SYNPO2Q9UMS6 1093 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 SOX13Q9UN79 622 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 CCR1P32246 355 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 TMEM132BQ14DG7 1078 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 GALNTL6Q49A17 601 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 ZNF786Q8N393 782 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 AGAP11Q8TF27 550 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 CDT1Q9H211 546 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 CRLS1Q9UJA2 301 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 C15orf41Q9Y2V0 281 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 CNTNAP2Q9UHC6 1331 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 PHGDHO43175 533 aaKnown RBP17.61■□□□□ 0.41
SGCB-201ENST00000381431 CCNE2O96020 404 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 GTF2A2P52657 109 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 SPDYCQ5MJ68 293 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 ISLR2Q6UXK2 745 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 ZBTB10Q96DT7 871 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 VPS50Q96JG6 964 aa17.61■□□□□ 0.41
SGCB-201ENST00000381431 FBXO21O94952 628 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 YBX3P16989 372 aaKnown RBP eCLIP17.6■□□□□ 0.41
SGCB-201ENST00000381431 POLNQ7Z5Q5 900 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 CENPTQ96BT3 561 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 MRGBPQ9NV56 204 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.6■□□□□ 0.41
SGCB-201ENST00000381431 FAM237BA0A1B0GVD1 139 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 IRF6O14896 467 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 GPR182O15218 404 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 LHX1P48742 406 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 TTC33Q6PID6 262 aaPredicted RBP17.6■□□□□ 0.41
SGCB-201ENST00000381431 KCNMB4Q86W47 210 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 TAGAPQ8N103 731 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 C12orf29Q8N999 325 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 PGLYRP2Q96PD5 576 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 BRD8Q9H0E9 1235 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 PIF1Q9H611 641 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 RNF112Q9ULX5 631 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.6■□□□□ 0.41
SGCB-201ENST00000381431 CLASP2O75122 1294 aaKnown RBP17.6■□□□□ 0.41
SGCB-201ENST00000381431 HSPA1AP0DMV8 641 aaKnown RBP17.6■□□□□ 0.41
SGCB-201ENST00000381431 HSPA1BP0DMV9 641 aaKnown RBP17.6■□□□□ 0.41
SGCB-201ENST00000381431 ZNF177Q13360 481 aaPredicted RBP17.6■□□□□ 0.41
SGCB-201ENST00000381431 VGLL4Q14135 290 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 DIS3LQ8TF46 1054 aaKnown RBP17.6■□□□□ 0.41
SGCB-201ENST00000381431 CDCA5Q96FF9 252 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 C17orf80Q9BSJ5 609 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 PDP2Q9P2J9 529 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 COG5Q9UP83 839 aa17.6■□□□□ 0.41
SGCB-201ENST00000381431 FOXO6A8MYZ6 492 aa17.59■□□□□ 0.41
SGCB-201ENST00000381431 PROCP04070 461 aa17.59■□□□□ 0.41
SGCB-201ENST00000381431 LGALS2P05162 132 aa17.59■□□□□ 0.41
SGCB-201ENST00000381431 CDH17Q12864 832 aa17.59■□□□□ 0.41
SGCB-201ENST00000381431 ZNF470Q6ECI4 717 aa17.59■□□□□ 0.41
SGCB-201ENST00000381431 SNRNP25Q9BV90 132 aaKnown RBP17.59■□□□□ 0.41
SGCB-201ENST00000381431 ULBP1Q9BZM6 244 aa17.59■□□□□ 0.41
SGCB-201ENST00000381431 TMEM134Q9H6X4 195 aa17.59■□□□□ 0.41
SGCB-201ENST00000381431 RIPK3Q9Y572 518 aa17.59■□□□□ 0.41
SGCB-201ENST00000381431 PRPF4O43172 522 aaKnown RBP eCLIP17.59■□□□□ 0.41
SGCB-201ENST00000381431 SERPIND1P05546 499 aa17.59■□□□□ 0.41
SGCB-201ENST00000381431 HDAC4P56524 1084 aa17.59■□□□□ 0.41
SGCB-201ENST00000381431 OVOS1Q6IE37 1185 aa17.59■□□□□ 0.41
SGCB-201ENST00000381431 ETNK2Q9NVF9 386 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms