RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 LRIT3Q3SXY7 679 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 RSBN1Q5VWQ0 802 aaPredicted RBP9.65□□□□□ -0.86
PTPRA-204ENST00000380393 LYPD8Q6UX82 237 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.65□□□□□ -0.86
PTPRA-204ENST00000380393 MINDY2Q8NBR6 621 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 TP53INP1Q96A56 240 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 TMEM79Q9BSE2 394 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 FRMD8Q9BZ67 464 aaPredicted RBP9.65□□□□□ -0.86
PTPRA-204ENST00000380393 OR2B2Q9GZK3 357 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 TRPV6Q9H1D0 765 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 IGSF5Q9NSI5 407 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 LGALS13Q9UHV8 139 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 C2orf81A6NN90 581 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 H3BMQ9 156 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 ZNF701M0R085 212 aaPredicted RBP9.65□□□□□ -0.86
PTPRA-204ENST00000380393 KRT7P08729 469 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 HNF1BP35680 557 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 INAVAQ3KP66 663 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 ZBED5Q49AG3 693 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 NAALADL2Q58DX5 795 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.65□□□□□ -0.86
PTPRA-204ENST00000380393 FBXL6Q8N531 539 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 CCDC89Q8N998 374 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 DENND1AQ8TEH3 1009 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 GRK7Q8WTQ7 553 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 LRGUKQ96M69 825 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 COG8Q96MW5 612 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 RNF26Q9BY78 433 aaPredicted RBP9.65□□□□□ -0.86
PTPRA-204ENST00000380393 DCLK3Q9C098 648 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 TRABDQ9H4I3 376 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 RMND5AQ9H871 391 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 C17orf75Q9HAS0 396 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 COQ3Q9NZJ6 369 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 ZNF229Q9UJW7 825 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 AMFRQ9UKV5 643 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 PTPN22Q9Y2R2 807 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 CAB39Q9Y376 341 aaPredicted RBP9.65□□□□□ -0.86
PTPRA-204ENST00000380393 MYH3P11055 1940 aa9.65□□□□□ -0.87
PTPRA-204ENST00000380393 CCDC194A0A1B0GVG4 234 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 SLC9A3R1O14745 358 aaPredicted RBP9.64□□□□□ -0.87
PTPRA-204ENST00000380393 H6PDO95479 791 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 TTC4O95801 387 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 SERPINB2P05120 415 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 KRT8P05787 483 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 KRT15P19012 456 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 NR2C2P49116 596 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 GPR85P60893 370 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 SNX17Q15036 470 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 LRRC41Q15345 812 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 GPR107Q5VW38 600 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 SLX4IPQ5VYV7 408 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 ALKBH2Q6NS38 261 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 FAM109AQ8N4B1 249 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 TTC13Q8NBP0 860 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 FANCFQ9NPI8 374 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 PPARGC1AQ9UBK2 798 aaKnown RBP9.64□□□□□ -0.87
PTPRA-204ENST00000380393 MYRFQ9Y2G1 1151 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 AP4S1Q9Y587 144 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 TAF1LQ8IZX4 1826 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 ANKRD63C9JTQ0 380 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 SLC22A1O15245 554 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 EXTL3O43909 919 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 NOL3O60936 208 aaKnown RBP9.64□□□□□ -0.87
PTPRA-204ENST00000380393 JRKO75564 520 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 MMP10P09238 476 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 ZNF182P17025 639 aaPredicted RBP9.64□□□□□ -0.87
PTPRA-204ENST00000380393 CCNE1P24864 410 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 PTGIRP43119 386 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 POU6F1Q14863 301 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 KRT80Q6KB66 452 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 PRR5LQ6MZQ0 368 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 ALYREFQ86V81 257 aaKnown RBP9.64□□□□□ -0.87
PTPRA-204ENST00000380393 CATSPER3Q86XQ3 398 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 UNC45BQ8IWX7 931 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 SYCE1Q8N0S2 351 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 PQLC1Q8N2U9 271 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 CADM2Q8N3J6 435 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 AADATQ8N5Z0 425 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 LEMD2Q8NC56 503 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 OR5H6Q8NGV6 325 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 TANKQ92844 425 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 NXPE3Q969Y0 559 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 HEXIM2Q96MH2 286 aaKnown RBP9.64□□□□□ -0.87
PTPRA-204ENST00000380393 YME1L1Q96TA2 773 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 TSG101Q99816 390 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 USB1Q9BQ65 265 aaKnown RBP9.64□□□□□ -0.87
PTPRA-204ENST00000380393 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.64□□□□□ -0.87
PTPRA-204ENST00000380393 ZNF219Q9P2Y4 722 aaPredicted RBP9.64□□□□□ -0.87
PTPRA-204ENST00000380393 TAGLN3Q9UI15 199 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 LY75O60449 1722 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 IQANK1A0A1B0GTG1 560 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 GSG1L2A8MUP6 293 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 DYNC1LI2O43237 492 aaPredicted RBP9.64□□□□□ -0.87
PTPRA-204ENST00000380393 NADKO95544 446 aaPredicted RBP9.64□□□□□ -0.87
PTPRA-204ENST00000380393 MYL2P10916 166 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 ARL4CP56559 192 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 CREB5Q02930 508 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 LDLRAP1Q5SW96 308 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 LYSMD3Q7Z3D4 306 aa9.64□□□□□ -0.87
PTPRA-204ENST00000380393 ART4Q93070 314 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms