RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 TRABDQ9H4I3 376 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 C10orf88Q9H8K7 445 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 ACTR5Q9H9F9 607 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 POPDC2Q9HBU9 364 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 PNPLA8Q9NP80 782 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 XPNPEP3Q9NQH7 507 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 CNGB3Q9NQW8 809 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 RNF19AQ9NV58 838 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 ETNK2Q9NVF9 386 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 TBK1Q9UHD2 729 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 DSEQ9UL01 958 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 HEY1Q9Y5J3 304 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 RAD54BQ9Y620 910 aa10.86□□□□□ -0.67
POLR2J3-201ENST00000379340 TSC2P49815 1807 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 ARL5CA6NH57 179 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 VIMP08670 466 aaKnown RBP10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 CTSHP09668 335 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 KRT15P19012 456 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 RBL1P28749 1068 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 GBP2P32456 591 aaPredicted RBP10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 STX2P32856 288 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 IL9RQ01113 521 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 GRIK3Q13003 919 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 PTK7Q13308 1070 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 QPCTQ16769 361 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 RAB41Q5JT25 222 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 FAM26DQ5JW98 314 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 MAP3K21Q5TCX8 1036 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 AGMOQ6ZNB7 445 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 C3orf62Q6ZUJ4 267 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 PAQR9Q6ZVX9 377 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 FAM35AQ86V20 835 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 METTL23Q86XA0 190 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 SCML4Q8N228 414 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 ANKRD42Q8N9B4 389 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 IRGQQ8WZA9 623 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 WNT8BQ93098 351 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 NTAN1Q96AB6 310 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 SMARCD1Q96GM5 515 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 TRIM62Q9BVG3 475 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 RASSF4Q9H2L5 321 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 CRTAC1Q9NQ79 661 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 RAB6BQ9NRW1 208 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 KRT82Q9NSB4 513 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 USP3Q9Y6I4 520 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 TEX264Q9Y6I9 313 aa10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 TDRD15B5MCY1 1934 aaKnown RBP10.85□□□□□ -0.67
POLR2J3-201ENST00000379340 TCRBV7S3A2A0A539 114 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 ATP2C2O75185 946 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 AP1G2O75843 785 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 DGKIO75912 1065 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 STK10O94804 968 aaKnown RBP10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 CYP11A1P05108 521 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 ASGR1P07306 291 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 GHRP10912 638 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 PRKAR2AP13861 404 aaKnown RBP10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 TFE3P19532 575 aaPredicted RBP10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 ACAT1P24752 427 aaKnown RBP10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 FDFT1P37268 417 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 MSH2P43246 934 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 IFNAR2P48551 515 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 SCNN1GP51170 649 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 CLCNKBP51801 687 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 TKTL1P51854 596 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 DAOAP59103 153 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 SARNPP82979 210 aaKnown RBP10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 CACNB2Q08289 660 aaPredicted RBP10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 SCAPQ12770 1279 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 IFT88Q13099 833 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 DSC3Q14574 896 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 UPP1Q16831 310 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 MSS51Q4VC12 460 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 DCAF6Q58WW2 860 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 NCBP2-AS2Q69YL0 99 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 HEATR6Q6AI08 1181 aaKnown RBP10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 PDZD4Q76G19 769 aaPredicted RBP10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 TAX1BP1Q86VP1 789 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 VPS52Q8N1B4 723 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 CCDC185Q8N715 623 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 MAFAQ8NHW3 353 aaPredicted RBP10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 FBF1Q8TES7 1133 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 APBB2Q92870 758 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 GRAMD1AQ96CP6 724 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 PGAP3Q96FM1 320 aaPredicted RBP10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 OLFM3Q96PB7 478 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 XAB2Q9HCS7 855 aaKnown RBP10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 EYSQ5T1H1 3165 aa10.84□□□□□ -0.67
POLR2J3-201ENST00000379340 COL4A4P53420 1690 aaPredicted RBP10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 A0A0U1RQF3 1178 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 IQANK1A0A1B0GTG1 560 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 CLDN5O00501 218 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 TRDMT1O14717 391 aaKnown RBP10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 INPPL1O15357 1258 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 FSBPO95073 299 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 ZWINTO95229 277 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 CPP00450 1065 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 F9P00740 461 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 CREB1P16220 341 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 CCND3P30281 292 aaPredicted RBP10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 SSTR1P30872 391 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms