RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 LDLRP01130 860 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 CTSHP09668 335 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 TPBGLP0DKB5 382 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 RXRBP28702 533 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 ZNF772Q68DY9 489 aaPredicted RBP17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 ISLR2Q6UXK2 745 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 PLEKHM3Q6ZWE6 761 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 IRF2BP1Q8IU81 584 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 VPS33AQ96AX1 596 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 SH3GL1Q99961 368 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 UNKQ9C0B0 810 aaKnown RBP17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 ELP3Q9H9T3 547 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 MIPP30301 263 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 CD151P48509 253 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 SLC25A3Q00325 362 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 KCTD21Q4G0X4 260 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 C3orf67Q6ZVT6 689 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 ZSCAN18Q8TBC5 510 aaPredicted RBP17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 CEP41Q9BYV8 373 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 RABGEF1Q9UJ41 708 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 PHGDHO43175 533 aaKnown RBP17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 ETS1P14921 441 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 SHMT1P34896 483 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 ARHGEF6Q15052 776 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 AARS2Q5JTZ9 985 aaKnown RBP17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 SPANXN3Q5MJ09 141 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 SAMD4BQ5PRF9 694 aaKnown RBP17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 IRF2BP2Q7Z5L9 587 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 KCNMB4Q86W47 210 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 DCP1BQ8IZD4 617 aaKnown RBP17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 SYTL5Q8TDW5 730 aaPredicted RBP17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 RMND5AQ9H871 391 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 SYTL2Q9HCH5 934 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 SFMBT1Q9UHJ3 866 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 RAD54BQ9Y620 910 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 KIF20BQ96Q89 1820 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 PXDNQ92626 1479 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 MEGF6O75095 1541 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 TOMM70O94826 608 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 OCM2P0CE71 109 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 OCMP0CE72 109 aaPredicted RBP17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 PKNOX1P55347 436 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 PARP6Q2NL67 630 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 C16orf46Q6P387 395 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 FAM136AQ96C01 138 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 PHF21BQ96EK2 531 aa17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 PIH1D1Q9NWS0 290 aaKnown RBP17.57■□□□□ 0.4
PTP4A1-201ENST00000370651 LINC00854A0A1B0GVQ3 168 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 C2orf81A6NN90 581 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 ALDH1A3P47895 512 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 EIF2B2P49770 351 aaKnown RBP17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 TTLL9Q3SXZ7 439 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 HEATR4Q86WZ0 1026 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 ACP6Q9NPH0 428 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 COMMD8Q9NX08 183 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 DDTLA6NHG4 134 aaPredicted RBP17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 CFAP99D6REC4 459 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 TADA2AO75478 443 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 SLC2A3P11169 496 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 ANPEPP15144 967 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 TAL1P17542 331 aaPredicted RBP17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 PSMB9P28065 219 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 IL5RAQ01344 420 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 CDH17Q12864 832 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 FAM98BQ52LJ0 330 aaKnown RBP17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 DHRSXQ8N5I4 330 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 PIF1Q9H611 641 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 KLK14Q9P0G3 267 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 LIASO43766 372 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 EFCAB14O75071 495 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 EIF4BP23588 611 aaKnown RBP17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 PRIM2P49643 509 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 DLG4P78352 724 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 TSHZ1Q6ZSZ6 1077 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 ANKS3Q6ZW76 656 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 KAT2BQ92831 832 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 MTERF3Q96E29 417 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 CRLS1Q9UJA2 301 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 TSPAN16Q9UKR8 245 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 NDUFAF1Q9Y375 327 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 COMMD3-BMI1R4GMX3 469 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 ASTN1O14525 1302 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 AFF2P51816 1311 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 DIP2BQ9P265 1576 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 SOAT1P35610 550 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 FLT3P36888 993 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 NAB1Q13506 487 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 C1orf186Q6ZWK4 172 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 DHDDSQ86SQ9 333 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 ZNF512Q96ME7 567 aaPredicted RBP17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 C9orf16Q9BUW7 83 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 NMRAL1Q9HBL8 299 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 PXMP2Q9NR77 195 aa17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 SCAF8Q9UPN6 1271 aaKnown RBP17.56■□□□□ 0.4
PTP4A1-201ENST00000370651 C2CD2LO14523 706 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 CXCL8P10145 99 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 NR2C2P49116 596 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 RIPK1Q13546 671 aa17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 MAPRE1Q15691 268 aaKnown RBP17.55■□□□□ 0.4
PTP4A1-201ENST00000370651 MAP4K3Q8IVH8 894 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms