RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 FAM102BQ5T8I3 360 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 DAB2IPQ5VWQ8 1189 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 NAIF1Q69YI7 327 aaPredicted RBP11.96□□□□□ -0.49
USF1-201ENST00000368019 SLFN12LQ6IEE8 588 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 SWSAP1Q6NVH7 229 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 HFE2Q6ZVN8 426 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 SLC24A5Q71RS6 500 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 UBR7Q8N806 425 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 PPFIBP2Q8ND30 876 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 ZSWIM2Q8NEG5 633 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 RAB3IL1Q8TBN0 382 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 EDAQ92838 391 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 IFT43Q96FT9 208 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 NR1H4Q96RI1 486 aaPredicted RBP11.96□□□□□ -0.49
USF1-201ENST00000368019 ADAM2Q99965 735 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 PAIP2Q9BPZ3 127 aaKnown RBP11.96□□□□□ -0.49
USF1-201ENST00000368019 SYNCQ9H7C4 482 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 PNPLA8Q9NP80 782 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 SLCO1B3Q9NPD5 702 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 ZNF302Q9NR11 478 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 DNAJC17Q9NVM6 304 aaKnown RBP11.96□□□□□ -0.49
USF1-201ENST00000368019 MKS1Q9NXB0 559 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 PDP2Q9P2J9 529 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 ARHGAP28Q9P2N2 729 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 STX18Q9P2W9 335 aaKnown RBP11.96□□□□□ -0.49
USF1-201ENST00000368019 DNPEPQ9ULA0 475 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 LRFN2Q9ULH4 789 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 GRID1Q9ULK0 1009 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 ST3GAL5Q9UNP4 418 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 ZNF148Q9UQR1 794 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 PCDHB7Q9Y5E2 793 aa11.96□□□□□ -0.49
USF1-201ENST00000368019 MAGEA13PA6NCF6 341 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 GPR182O15218 404 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 GSC2O15499 205 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 GPR32O75388 356 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 CSDE1O75534 798 aaKnown RBP11.95□□□□□ -0.5
USF1-201ENST00000368019 NEK3P51956 506 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 CRYBB1P53674 252 aaPredicted RBP11.95□□□□□ -0.5
USF1-201ENST00000368019 RPL26P61254 145 aaKnown RBP11.95□□□□□ -0.5
USF1-201ENST00000368019 NHLH1Q02575 133 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 SLC34A1Q06495 639 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 PDIA2Q13087 525 aaKnown RBP11.95□□□□□ -0.5
USF1-201ENST00000368019 KCNC3Q14003 757 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 KPNB1Q14974 876 aaKnown RBP11.95□□□□□ -0.5
USF1-201ENST00000368019 MUM1Q2TAK8 710 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 SLC30A9Q6PML9 568 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 BMP8AQ7Z5Y6 402 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 ALYREFQ86V81 257 aaKnown RBP11.95□□□□□ -0.5
USF1-201ENST00000368019 KIRREL3Q8IZU9 778 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 ARHGAP18Q8N392 663 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 LINC01465Q8N7H1 131 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 NAT8LQ8N9F0 302 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 VN1R2Q8NFZ6 395 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 KCNV2Q8TDN2 545 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 FNIP1Q8TF40 1166 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 APOPT1Q96IL0 206 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 PWWP2AQ96N64 755 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 TSC22D3Q99576 134 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 CGRRF1Q99675 332 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 C11orf70Q9BRQ4 267 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 MAK16Q9BXY0 300 aaKnown RBP11.95□□□□□ -0.5
USF1-201ENST00000368019 CADM1Q9BY67 442 aaKnown RBP11.95□□□□□ -0.5
USF1-201ENST00000368019 CWH43Q9H720 699 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 ELAC1Q9H777 363 aaKnown RBP11.95□□□□□ -0.5
USF1-201ENST00000368019 MANSC1Q9H8J5 431 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 NMRK1Q9NWW6 199 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 KANSL3Q9P2N6 904 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 HCSTQ9UBK5 93 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 ANGPTL2Q9UKU9 493 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 GINS2Q9Y248 185 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 PCDHB12Q9Y5F1 795 aa11.95□□□□□ -0.5
USF1-201ENST00000368019 KMT2EQ8IZD2 1858 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 DPPA5A6NC42 116 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 TBKBP1A7MCY6 615 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 FGF18O76093 207 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 SNUPNO95149 360 aaKnown RBP11.94□□□□□ -0.5
USF1-201ENST00000368019 PSMG1O95456 288 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 WEE2P0C1S8 567 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 CD58P19256 250 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 SP100P23497 879 aaPredicted RBP11.94□□□□□ -0.5
USF1-201ENST00000368019 GNA15P30679 374 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 PIK3CAP42336 1068 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 CDKN2BP42772 138 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 ETV4P43268 484 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 ARFIP2P53365 341 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 GPX6P59796 221 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 ERVFC1P60507 584 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 MXRA7P84157 204 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 AP1B1Q10567 949 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 PRKD1Q15139 912 aaPredicted RBP11.94□□□□□ -0.5
USF1-201ENST00000368019 MAPK6Q16659 721 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 DUSP6Q16828 381 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 KIZQ2M2Z5 673 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 AP1ARQ63HQ0 302 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 CWF19L1Q69YN2 538 aaKnown RBP11.94□□□□□ -0.5
USF1-201ENST00000368019 ZNF449Q6P9G9 518 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 MFSD7Q6UXD7 560 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 LRRC74BQ6ZQY2 392 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 BBS12Q6ZW61 710 aa11.94□□□□□ -0.5
USF1-201ENST00000368019 MAEAQ7L5Y9 396 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms