RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 PHF13Q86YI8 300 aaPredicted RBP11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 ELMOD1Q8N336 334 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 LEMD2Q8NC56 503 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 TTC8Q8TAM2 541 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 CHFRQ96EP1 664 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 PPP1R10Q96QC0 940 aaKnown RBP11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 LRRC3Q9BY71 257 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 ZNF518BQ9C0D4 1074 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 SDCBP2Q9H190 292 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 PDCL3Q9H2J4 239 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 SLITRK6Q9H5Y7 841 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 ABCB6Q9NP58 842 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 TMEM9BQ9NQ34 198 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 RNF14Q9UBS8 474 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 TUBGCP4Q9UGJ1 667 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 KIAA1257Q9ULG3 409 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 SLC8A2Q9UPR5 921 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 GPSM3Q9Y4H4 160 aa11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 HELZP42694 1942 aaKnown RBP11.81□□□□□ -0.52
CSNK1E-202ENST00000366216 MED7O43513 233 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 TRAPPC3O43617 180 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 TADA3O75528 432 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 RHOBTB1O94844 696 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 CALCAP01258 141 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 FAM163BP0C2L3 166 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 MYL4P12829 197 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 LRPAP1P30533 357 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 NSFP46459 744 aaKnown RBP11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 RAD23BP54727 409 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 EPHA5P54756 1037 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 UPP1Q16831 310 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 STXBP5Q5T5C0 1151 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 PDZD3Q86UT5 571 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 PROSER1Q86XN7 944 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 MCOLN2Q8IZK6 566 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 SHKBP1Q8TBC3 707 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 WHAMMQ8TF30 809 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 C18orf25Q96B23 403 aaPredicted RBP11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 CYFIP2Q96F07 1278 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 ZFYVE19Q96K21 471 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 ZNF512Q96ME7 567 aaPredicted RBP11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 ZNF560Q96MR9 790 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 PHF12Q96QT6 1004 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 OSBPL9Q96SU4 736 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 SMYD3Q9H7B4 428 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 OSGEPQ9NPF4 335 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 ASAH2Q9NR71 780 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 SLC38A7Q9NVC3 462 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 GDAP2Q9NXN4 497 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 GTSE1Q9NYZ3 720 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 KLK13Q9UKR3 277 aa11.8□□□□□ -0.52
CSNK1E-202ENST00000366216 CTAGE15A4D2H0 777 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 CDX4O14627 284 aaPredicted RBP11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 KHNYNO15037 678 aaKnown RBP11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 BUB1BO60566 1050 aaPredicted RBP11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 ATG13O75143 517 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 FTCDO95954 541 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 CTAGE8P0CG41 777 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 VDRP11473 427 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 BRD2P25440 801 aaKnown RBP11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 CDH8P55286 799 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 ARPP19P56211 112 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 MRPL58Q14197 206 aaKnown RBP11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 RPS6KA1Q15418 735 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 NAA35Q5VZE5 725 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 TPGS2Q68CL5 300 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 C11orf63Q6NUN7 778 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 C19orf48Q6RUI8 117 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 MON1BQ7L1V2 547 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 PEX26Q7Z412 305 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 DAAM2Q86T65 1068 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 CTAGE6Q86UF2 777 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 NT5DC3Q86UY8 548 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 UNC93AQ86WB7 457 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 CTAGE4Q8IX94 777 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 CAMKK1Q8N5S9 505 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 SLC4A11Q8NBS3 891 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 TMEM35BQ8NCS4 154 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 DEFB124Q8NES8 71 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 ZNF653Q96CK0 615 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 TMEM176AQ96HP8 235 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 ELOVL4Q9GZR5 314 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 LHX5Q9H2C1 402 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 CRISPLD1Q9H336 500 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 CTTNBP2NLQ9P2B4 639 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 CNOT8Q9UFF9 292 aaKnown RBP11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 CEP83Q9Y592 693 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 ANAPC1Q9H1A4 1944 aa11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 URB1O60287 2271 aaKnown RBP11.79□□□□□ -0.52
CSNK1E-202ENST00000366216 PPEF2O14830 753 aa11.78□□□□□ -0.52
CSNK1E-202ENST00000366216 SRGAP2O75044 1071 aa11.78□□□□□ -0.52
CSNK1E-202ENST00000366216 CAPNS1P04632 268 aa11.78□□□□□ -0.52
CSNK1E-202ENST00000366216 TAF6P49848 677 aa11.78□□□□□ -0.52
CSNK1E-202ENST00000366216 TNK2Q07912 1038 aa11.78□□□□□ -0.52
CSNK1E-202ENST00000366216 TWF1Q12792 350 aa11.78□□□□□ -0.52
CSNK1E-202ENST00000366216 PTP4A2Q12974 167 aa11.78□□□□□ -0.52
CSNK1E-202ENST00000366216 STILQ15468 1287 aa11.78□□□□□ -0.52
CSNK1E-202ENST00000366216 CNGA2Q16280 664 aa11.78□□□□□ -0.52
CSNK1E-202ENST00000366216 SV2CQ496J9 727 aa11.78□□□□□ -0.52
CSNK1E-202ENST00000366216 ZNF394Q53GI3 561 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms