RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 MMP8P22894 467 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 DUSP1P28562 367 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 THBS4P35443 961 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 IGHMBP2P38935 993 aaKnown RBP4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 NR4A2P43354 598 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 GSTM5P46439 218 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 TM4SF4P48230 202 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 VPS41P49754 854 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 NSUN2Q08J23 767 aaKnown RBP eCLIP4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 SEMA3BQ13214 749 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 STIM1Q13586 685 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 RBMS2Q15434 407 aaKnown RBP4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 MAPKAPK3Q16644 382 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 ANKRD13BQ86YJ7 626 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 OR2C3Q8N628 320 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 NRACQ8N912 160 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 BRI3BPQ8WY22 251 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 OVCA2Q8WZ82 227 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 AKAP1Q92667 903 aaKnown RBP eCLIP4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 ZNF566Q969W8 418 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 FCRL5Q96RD9 977 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 GDF15Q99988 308 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 TM2D2Q9BX73 214 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 TMEM8AQ9HCN3 771 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 ASNSD1Q9NWL6 643 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 CCDC187A0A096LP49 1063 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 C16orf96A6NNT2 1141 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 PODXLO00592 558 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 PRC1O43663 620 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 CD63P08962 238 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 CTSAP10619 480 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 ALADP13716 330 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 PRF1P14222 555 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 EEF1GP26641 437 aaKnown RBP4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 CPA2P48052 419 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 CCT4P50991 539 aaKnown RBP4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 LAMB3Q13751 1172 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 ELF2Q15723 593 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 IL31Q6EBC2 164 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 CCDC144NLQ6NUI1 221 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 DEF8Q6ZN54 512 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 TFAP2DQ7Z6R9 452 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 OR52L2PQ8NGH6 319 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 PIGKQ92643 395 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 ZBTB9Q96C00 473 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 CCDC138Q96M89 665 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 NUDT22Q9BRQ3 303 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 CERS4Q9HA82 394 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 SIRT4Q9Y6E7 314 aaPredicted RBP4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 ZMYM2Q9UBW7 1377 aa4.73□□□□□ -1.65
RNU6-553P-201ENST00000364047 PRYO14603 147 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 TLR2O60603 784 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 MYL1P05976 194 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 NDUFS1P28331 727 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 AK2P54819 239 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 GAB1Q13480 694 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 PICALMQ13492 652 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 CCDC181Q5TID7 509 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 IZUMO3Q5VZ72 239 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 ZNF793Q6ZN11 406 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 PIK3AP1Q6ZUJ8 805 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 KRT27Q7Z3Y8 459 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 RASGRP3Q8IV61 690 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 SENP7Q9BQF6 1050 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 SCNM1Q9BWG6 230 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 AGO4Q9HCK5 861 aaKnown RBP4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 RXFP3Q9NSD7 469 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 PHTF1Q9UMS5 762 aa4.72□□□□□ -1.65
RNU6-553P-201ENST00000364047 LY6G6EA0A0G2JKS1 128 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 C2CD4BA6NLJ0 364 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 CNOT3O75175 753 aaKnown RBP4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 USP12O75317 370 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 TMEM191BP0C7N4 346 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 ST6GAL1P15907 406 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 RPS6KB1P23443 525 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 HOXA7P31268 230 aaPredicted RBP4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 HOXD12P35452 270 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 IDUAP35475 653 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 HSPA7P48741 367 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 NEK3P51956 506 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 MTA1Q13330 715 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 TRIM71Q2Q1W2 868 aaKnown RBP4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 ZNF260Q3ZCT1 412 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 AWAT2Q6E213 333 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 ACSM6Q6P461 480 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 KYAT3Q6YP21 454 aaKnown RBP4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 RBM44Q6ZP01 1051 aaKnown RBP4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 UBE2Q1Q7Z7E8 422 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 TTC30AQ86WT1 665 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 UEVLDQ8IX04 471 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 PMM1Q92871 262 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 TRMT61AQ96FX7 289 aaKnown RBP4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 CDCP1Q9H5V8 836 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 ARNT2Q9HBZ2 717 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 MLXIPLQ9NP71 852 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 PCDHGB2Q9Y5G2 931 aa4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 SETD1BQ9UPS6 1966 aaKnown RBP4.71□□□□□ -1.66
RNU6-553P-201ENST00000364047 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.7□□□□□ -1.66
RNU6-553P-201ENST00000364047 SLC22A23A1A5C7 686 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms