RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 DMAP1Q9NPF5 467 aaPredicted RBP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 GTSE1Q9NYZ3 720 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 TFR2Q9UP52 801 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 PCDHA2Q9Y5H9 948 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 CHD4Q14839 1912 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 NVLO15381 856 aaKnown RBP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 TGFB1I1O43294 461 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 RTN3O95197 1032 aaPredicted RBP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 DARSP14868 501 aaKnown RBP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 CCR1P32246 355 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 HSD17B3P37058 310 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 STX3Q13277 289 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 USP10Q14694 798 aaKnown RBP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 PABPC1LQ4VXU2 614 aaKnown RBP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 FNDC3BQ53EP0 1204 aaKnown RBP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 TPGS1Q6ZTW0 290 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 RAB42Q8N4Z0 105 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 CLEC4DQ8WXI8 215 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 MYLIPQ8WY64 445 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 SHISA4Q96DD7 197 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 TACO1Q9BSH4 297 aaKnown RBP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 LRRC40Q9H9A6 602 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 TLR8Q9NR97 1041 aaKnown RBP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 SMARCAL1Q9NZC9 954 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 COL20A1Q9P218 1284 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 NCKAP1Q9Y2A7 1128 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 GIT1Q9Y2X7 761 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 FIS1Q9Y3D6 152 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 CDY1Q9Y6F8 540 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 HACD1B0YJ81 288 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 GSTA4O15217 222 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 RALBP11234 206 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 RGS4P49798 205 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 HNRNPH2P55795 449 aaKnown RBP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 OXCT1P55809 520 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 POU5F1Q01860 360 aaKnown RBP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 SLC6A3Q01959 620 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 KCNA1Q09470 495 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 KIF19Q2TAC6 998 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 EFL1Q7Z2Z2 1120 aaKnown RBP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 PRUNE1Q86TP1 453 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 TMEM192Q8IY95 271 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 KATNAL2Q8IYT4 538 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 BAP1Q92560 729 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 PPWD1Q96BP3 646 aaKnown RBP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 FAXDC2Q96IV6 333 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 SAMD11Q96NU1 681 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 RPRD1AQ96P16 312 aaPredicted RBP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 VAT1Q99536 393 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 ORC6Q9Y5N6 252 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 SIGLEC16A6NMB1 481 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 GABRR2P28476 465 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 GRM5P41594 1212 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 KCNMA1Q12791 1236 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 LONRF1Q17RB8 773 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 DDX42Q86XP3 938 aaKnown RBP eCLIP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 C12orf50Q8NA57 414 aaPredicted RBP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 MAFAQ8NHW3 353 aaPredicted RBP7.25□□□□□ -1.25
RAB5B-201ENST00000360299 HLA-CQ95604 372 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 SHDQ96IW2 340 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 BTBD6Q96KE9 485 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 GBP5Q96PP8 586 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 CDT1Q9H211 546 aa7.25□□□□□ -1.25
RAB5B-201ENST00000360299 ADGRA2Q96PE1 1338 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 TIMM44O43615 452 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 MICAL2O94851 1124 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 PCDH8O95206 1070 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 PYGBP11216 843 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 CHN1P15882 459 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 RPL17P18621 184 aaKnown RBP7.24□□□□□ -1.25
RAB5B-201ENST00000360299 PBX1P40424 430 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 HADHAP40939 763 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 GYS2P54840 703 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 ARHGAP1Q07960 439 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 MORN1Q5T089 497 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 GPR158Q5T848 1215 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 ACBD5Q5T8D3 534 aaPredicted RBP7.24□□□□□ -1.25
RAB5B-201ENST00000360299 PRPF38BQ5VTL8 546 aaKnown RBP7.24□□□□□ -1.25
RAB5B-201ENST00000360299 KCNT2Q6UVM3 1135 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 SPDYE1Q8NFV5 336 aaPredicted RBP7.24□□□□□ -1.25
RAB5B-201ENST00000360299 ACTL9Q8TC94 416 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 EXT2Q93063 718 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 C18orf25Q96B23 403 aaPredicted RBP7.24□□□□□ -1.25
RAB5B-201ENST00000360299 SERPINB11Q96P15 392 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 EGFL8Q99944 293 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 FUT8Q9BYC5 575 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 NXF3Q9H4D5 531 aaKnown RBP7.24□□□□□ -1.25
RAB5B-201ENST00000360299 C20orf96Q9NUD7 363 aaPredicted RBP7.24□□□□□ -1.25
RAB5B-201ENST00000360299 THEGQ9P2T0 379 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 TRHDEQ9UKU6 1024 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 USP15Q9Y4E8 981 aaPredicted RBP7.24□□□□□ -1.25
RAB5B-201ENST00000360299 BRWD3Q6RI45 1802 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 IGLV3-22A0A075B6J6 115 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 TMEM247A6NEH6 219 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 OPLAHO14841 1288 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 TSPAN3O60637 253 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 CYP1A2P05177 515 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 HIST1H2AGP0C0S8 130 aaPredicted RBP7.24□□□□□ -1.25
RAB5B-201ENST00000360299 HIST1H2ADP20671 130 aa7.24□□□□□ -1.25
RAB5B-201ENST00000360299 BRCC3P46736 316 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms