RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 CDH17Q12864 832 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 CDH18Q13634 790 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 KYAT3Q6YP21 454 aaKnown RBP15.22■□□□□ 0.03
CHD4-201ENST00000357008 GMCL1Q96IK5 515 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 ROGDIQ9GZN7 287 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 TMEM39BQ9GZU3 492 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 PDGFCQ9NRA1 345 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 TRDMT1O14717 391 aaKnown RBP15.22■□□□□ 0.03
CHD4-201ENST00000357008 ASNA1O43681 348 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 SPANXN3Q5MJ09 141 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 TMEM26Q6ZUK4 368 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 EID3Q8N140 333 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 EHD4Q9H223 541 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 RNPEPQ9H4A4 650 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 ANKRD6Q9Y2G4 727 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 MGAT4DA6NG13 374 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 ADRA1DP25100 572 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 CRABP2P29373 138 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 SNAPC2Q13487 334 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 NFIL3Q16649 462 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 OTUD3Q5T2D3 398 aaPredicted RBP15.22■□□□□ 0.03
CHD4-201ENST00000357008 SETD9Q8NE22 299 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 KAT2BQ92831 832 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 CDRT15Q96T59 188 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 RGS18Q9NS28 235 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 C6orf203Q9P0P8 240 aaPredicted RBP15.22■□□□□ 0.03
CHD4-201ENST00000357008 FAM20BO75063 409 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 ITGALP20701 1170 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 RAP1GAPP47736 663 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 NAB1Q13506 487 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 SAMD4BQ5PRF9 694 aaKnown RBP15.22■□□□□ 0.03
CHD4-201ENST00000357008 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.22■□□□□ 0.03
CHD4-201ENST00000357008 ETNPPLQ8TBG4 499 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 RORBQ92753 470 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 DLG3Q92796 817 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 CEP44Q9C0F1 390 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 RERGLQ9H628 205 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 CACNA2D2Q9NY47 1150 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 KLK14Q9P0G3 267 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 RNF181Q9P0P0 153 aa15.22■□□□□ 0.03
CHD4-201ENST00000357008 A0A096LPK6 155 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 CPSF4O95639 269 aaKnown RBP15.21■□□□□ 0.03
CHD4-201ENST00000357008 FAAP100Q0VG06 881 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 BST2Q10589 180 aaKnown RBP15.21■□□□□ 0.03
CHD4-201ENST00000357008 POLD3Q15054 466 aaPredicted RBP15.21■□□□□ 0.03
CHD4-201ENST00000357008 DDR2Q16832 855 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 DHRSXQ8N5I4 330 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 DMAP1Q9NPF5 467 aaPredicted RBP15.21■□□□□ 0.03
CHD4-201ENST00000357008 SORCS3Q9UPU3 1222 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 EIF2B2P49770 351 aaKnown RBP15.21■□□□□ 0.03
CHD4-201ENST00000357008 ADARP55265 1226 aaKnown RBP15.21■□□□□ 0.03
CHD4-201ENST00000357008 TMEM119Q4V9L6 283 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 MFSD7Q6UXD7 560 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 C11orf96Q7Z7L8 435 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 SNX32Q86XE0 403 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 MREGQ8N565 214 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 PNMA5Q96PV4 448 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 TFRCP02786 760 aaKnown RBP15.21■□□□□ 0.03
CHD4-201ENST00000357008 EPB42P16452 691 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 ALDH1A3P47895 512 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 ST3GAL1Q11201 340 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 ITGB3BPQ13352 177 aaPredicted RBP15.21■□□□□ 0.03
CHD4-201ENST00000357008 SMIM5Q71RC9 77 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 ARHGEF19Q8IW93 802 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 SLC44A2Q8IWA5 706 aaPredicted RBP15.21■□□□□ 0.03
CHD4-201ENST00000357008 ADGRF2Q8IZF7 708 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 TPRKBQ9Y3C4 175 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 DCXO43602 365 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 MT-CO1P00395 513 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 GPC1P35052 558 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 PSMC6P62333 389 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 NEDD8Q15843 81 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 KCNMB4Q86W47 210 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 ELOVL6Q9H5J4 265 aa15.21■□□□□ 0.03
CHD4-201ENST00000357008 NR2C2P49116 596 aa15.21■□□□□ 0.02
CHD4-201ENST00000357008 NPY2RP49146 381 aa15.21■□□□□ 0.02
CHD4-201ENST00000357008 MAD2L1Q13257 205 aaPredicted RBP15.21■□□□□ 0.02
CHD4-201ENST00000357008 KHDRBS2Q5VWX1 349 aaKnown RBP15.21■□□□□ 0.02
CHD4-201ENST00000357008 CYLDQ9NQC7 956 aa15.21■□□□□ 0.02
CHD4-201ENST00000357008 DNPEPQ9ULA0 475 aa15.21■□□□□ 0.02
CHD4-201ENST00000357008 ACTL7BQ9Y614 415 aa15.21■□□□□ 0.02
CHD4-201ENST00000357008 WDR27A2RRH5 827 aa15.2■□□□□ 0.02
CHD4-201ENST00000357008 TMEM114B3SHH9 223 aa15.2■□□□□ 0.02
CHD4-201ENST00000357008 CYB561D2O14569 222 aa15.2■□□□□ 0.02
CHD4-201ENST00000357008 UNC5CO95185 931 aa15.2■□□□□ 0.02
CHD4-201ENST00000357008 ASS1P00966 412 aaKnown RBP15.2■□□□□ 0.02
CHD4-201ENST00000357008 PROCP04070 461 aa15.2■□□□□ 0.02
CHD4-201ENST00000357008 DCTN2Q13561 401 aaKnown RBP15.2■□□□□ 0.02
CHD4-201ENST00000357008 CROCCP3Q8IVE0 287 aa15.2■□□□□ 0.02
CHD4-201ENST00000357008 AGAP11Q8TF27 550 aa15.2■□□□□ 0.02
CHD4-201ENST00000357008 CAMKK2Q96RR4 588 aa15.2■□□□□ 0.02
CHD4-201ENST00000357008 APOL4Q9BPW4 351 aa15.2■□□□□ 0.02
CHD4-201ENST00000357008 SLC25A23Q9BV35 468 aa15.2■□□□□ 0.02
CHD4-201ENST00000357008 PRKD2Q9BZL6 878 aa15.2■□□□□ 0.02
CHD4-201ENST00000357008 DPY30Q9C005 99 aa15.2■□□□□ 0.02
CHD4-201ENST00000357008 CD163L1Q9NR16 1453 aa15.2■□□□□ 0.02
CHD4-201ENST00000357008 PNMA8CA0A1B0GUJ8 204 aa15.2■□□□□ 0.02
CHD4-201ENST00000357008 ERI2A8K979 691 aaKnown RBP15.2■□□□□ 0.02
CHD4-201ENST00000357008 ATG7O95352 703 aa15.2■□□□□ 0.02
CHD4-201ENST00000357008 OXCT1P55809 520 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms