RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ATP5BP06576 529 aaKnown RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 CAPN1P07384 714 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 FCGR1AP12314 374 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 TCN1P20061 433 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 PIK3CGP48736 1102 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 FXR2P51116 673 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 TBX4P57082 545 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 CHRNB3Q05901 458 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 TRIM32Q13049 653 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 GRIK4Q16099 956 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 CCNG2Q16589 344 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 ZC2HC1CQ53FD0 456 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 OVOS1Q6IE37 1185 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 CAPRIN2Q6IMN6 1127 aaKnown RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 RFX8Q6ZV50 586 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 CXorf40AQ8TE69 158 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 SUSD6Q92537 303 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 SYN2Q92777 582 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 ROPN1BQ9BZX4 212 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 KLHL31Q9H511 634 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 EPS8L2Q9H6S3 715 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 ROPN1Q9HAT0 212 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 XPNPEP3Q9NQH7 507 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 AVENQ9NQS1 362 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 ARHGEF3Q9NR81 526 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 RRN3Q9NYV6 651 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 ANAPC2Q9UJX6 822 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 RPL26L1Q9UNX3 145 aaKnown RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 MRC1P22897 1456 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 CAPN15O75808 1086 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 VEGFAP15692 232 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 RASA1P20936 1047 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 MAGEA10P43363 369 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 SLC44A2Q8IWA5 706 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 CPB2Q96IY4 423 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 MTMR12Q9C0I1 747 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 POLG2Q9UHN1 485 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 MCM8Q9UJA3 840 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 FBXO2Q9UK22 296 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 USP18Q9UMW8 372 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 AP4E1Q9UPM8 1137 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 SNCAIPQ9Y6H5 919 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 KIDINS220Q9ULH0 1771 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 SPATA31A5Q5VU36 1347 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 SPATA31A7Q8IWB4 1347 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 ANXA5P08758 320 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 COMTP21964 271 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 SCNN1BP51168 640 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 COX10Q12887 443 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 FAM45BPQ6NSW5 357 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 FOXR2Q6PJQ5 311 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 PACS1Q6VY07 963 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 SH3RF1Q7Z6J0 888 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 ACOT1Q86TX2 421 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 ADSSL1Q8N142 457 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 DNERQ8NFT8 737 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 FAM172AQ8WUF8 416 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 SH2D3AQ9BRG2 576 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 ENTPD4Q9Y227 616 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 BIRC5O15392 142 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 MPOP05164 745 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 ITGB6P18564 788 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 CNTFP26441 200 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 HNRNPH3P31942 346 aaKnown RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 CCR1P32246 355 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 IFNGR2P38484 337 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 CTCFP49711 727 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 IL2P60568 153 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 IKBKEQ14164 716 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 FOXR1Q6PIV2 292 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 TLK2Q86UE8 772 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 SPATA4Q8NEY3 305 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 SGF29Q96ES7 293 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 GAS2L1Q99501 681 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 TARS2Q9BW92 718 aaKnown RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 CYP3A43Q9HB55 503 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 ATP13A1Q9HD20 1204 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 KLHL3Q9UH77 587 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 STARD13Q9Y3M8 1113 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 RPS6KL1Q9Y6S9 549 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 A0A087X0T9 212 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 SMIM31A0A1B0GVY4 71 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 MSCO60682 206 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 AVILO75366 819 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 SRGNP10124 158 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 RBP3P10745 1247 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 PABPC1P11940 636 aaKnown RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 ZNF23P17027 643 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 CCND1P24385 295 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 TLX1P31314 330 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 RFX5P48382 616 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 ALDH9A1P49189 494 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 COPZ1P61923 177 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 SETMARQ53H47 684 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 CDC73Q6P1J9 531 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 CYB5D1Q6P9G0 228 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 CASP12Q6UXS9 341 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 FAM220AQ7Z4H9 259 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 DAGLBQ8NCG7 672 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 USP6NLQ92738 828 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms