RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ZDHHC4Q9NPG8 344 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 CYLDQ9NQC7 956 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 TUBA8Q9NY65 449 aaPredicted RBP7.66□□□□□ -1.18
ZNF540-202ENST00000343599 MRPS23Q9Y3D9 190 aaKnown RBP7.66□□□□□ -1.18
ZNF540-202ENST00000343599 CDK2AP1O14519 115 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 KHNYNO15037 678 aaKnown RBP7.65□□□□□ -1.18
ZNF540-202ENST00000343599 MAGEC1O60732 1142 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 CER1O95813 267 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 PRKCBP05771 671 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 PDGFRBP09619 1106 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 OR52Z1P0C646 297 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 MYBL1P10243 752 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 GNAZP19086 355 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 CEBPZQ03701 1054 aaKnown RBP7.65□□□□□ -1.18
ZNF540-202ENST00000343599 UGCGQ16739 394 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 TMEM266Q2M3C6 531 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 ADCK5Q3MIX3 580 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 BLOC1S2Q6QNY1 142 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 ZNF572Q7Z3I7 529 aaPredicted RBP7.65□□□□□ -1.18
ZNF540-202ENST00000343599 CCDC65Q8IXS2 484 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 IQCKQ8N0W5 287 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 C4orf32Q8N8J7 132 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 SYT2Q8N9I0 419 aaPredicted RBP7.65□□□□□ -1.18
ZNF540-202ENST00000343599 SHKBP1Q8TBC3 707 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 TBCKQ8TEA7 893 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 USP33Q8TEY7 942 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 ZNF653Q96CK0 615 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 CNTNAP3BQ96NU0 1288 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 ZIM3Q96PE6 472 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 UIMC1Q96RL1 719 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 TMEM209Q96SK2 561 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 CNTNAP3Q9BZ76 1288 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 FAM49AQ9H0Q0 323 aaPredicted RBP7.65□□□□□ -1.18
ZNF540-202ENST00000343599 ADNPQ9H2P0 1102 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 VCX3BQ9H321 246 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 VCX3AQ9NNX9 186 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 POLMQ9NP87 494 aaPredicted RBP7.65□□□□□ -1.18
ZNF540-202ENST00000343599 OLFML3Q9NRN5 406 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 ZNHIT6Q9NWK9 470 aaKnown RBP7.65□□□□□ -1.18
ZNF540-202ENST00000343599 CROTQ9UKG9 612 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 SH3GLB1Q9Y371 365 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 GPSM3Q9Y4H4 160 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 YIPF1Q9Y548 306 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 ZNF638Q14966 1978 aaKnown RBP7.65□□□□□ -1.18
ZNF540-202ENST00000343599 AKR1B15C9JRZ8 316 aaPredicted RBP7.65□□□□□ -1.18
ZNF540-202ENST00000343599 TRIM38O00635 465 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 AXIN1O15169 862 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 EIF3DO15371 548 aaKnown RBP eCLIP7.65□□□□□ -1.18
ZNF540-202ENST00000343599 SPATA31C1P0DKV0 1188 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 PLS3P13797 630 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 CLCN3P51790 818 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 SUZ12Q15022 739 aaKnown RBP7.65□□□□□ -1.18
ZNF540-202ENST00000343599 SH2D4BQ5SQS7 431 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 ADALQ6DHV7 355 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 PARM1Q6UWI2 310 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 MMGT1Q8N4V1 131 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 PDILTQ8N807 584 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 PTPRN2Q92932 1015 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 ATP6V1G3Q96LB4 118 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 VCXQ9H320 206 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 PCDHB6Q9Y5E3 794 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 COMMD10Q9Y6G5 202 aa7.65□□□□□ -1.18
ZNF540-202ENST00000343599 TMEM247A6NEH6 219 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 ZNF233A6NK53 670 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 EIF3FO00303 357 aaPredicted RBP7.65□□□□□ -1.19
ZNF540-202ENST00000343599 VTNP04004 478 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 ACADSP16219 412 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 SUOXP51687 545 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 SH3BGRP55822 239 aaPredicted RBP7.65□□□□□ -1.19
ZNF540-202ENST00000343599 E2F1Q01094 437 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 SMAD1Q15797 465 aaKnown RBP7.65□□□□□ -1.19
ZNF540-202ENST00000343599 NT5DC1Q5TFE4 455 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 ATF7IP2Q5U623 682 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 GKAP1Q5VSY0 366 aaPredicted RBP7.65□□□□□ -1.19
ZNF540-202ENST00000343599 RNF220Q5VTB9 566 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 FSTL4Q6MZW2 842 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 KANK3Q6NY19 840 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 MREGQ8N565 214 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 ARFGAP2Q8N6H7 521 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 DYDC1Q8WWB3 177 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 CEP170P1Q96L14 293 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 DCLK3Q9C098 648 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 PPCSQ9HAB8 311 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 FBXL5Q9UKA1 691 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 CDH9Q9ULB4 789 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 EXOC7Q9UPT5 735 aa7.65□□□□□ -1.19
ZNF540-202ENST00000343599 GOLGA6L10A0A0M3HER8 536 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 PODXLO00592 558 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 HRO43593 1189 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 CHGBP05060 677 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 NQO1P15559 274 aaKnown RBP7.64□□□□□ -1.19
ZNF540-202ENST00000343599 RRM1P23921 792 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 GRIA2P42262 883 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 CD97P48960 835 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 KLC1Q07866 573 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 RUNX3Q13761 415 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 BMT2Q1RMZ1 405 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 WDR45BQ5MNZ6 344 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 TMEM154Q6P9G4 183 aa7.64□□□□□ -1.19
ZNF540-202ENST00000343599 METTL23Q86XA0 190 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms