RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 ITGA7Q13683 1181 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 LRRC6Q86X45 466 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 IFNLR1Q8IU57 520 aaPredicted RBP17.01■□□□□ 0.31
PRDM8-201ENST00000339711 LTFP02788 710 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 ELK3P41970 407 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 THOC5Q13769 683 aaKnown RBP17.01■□□□□ 0.31
PRDM8-201ENST00000339711 RNF135Q8IUD6 432 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 WNT8BQ93098 351 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 DUSP16Q9BY84 665 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 DMAP1Q9NPF5 467 aaPredicted RBP17.01■□□□□ 0.31
PRDM8-201ENST00000339711 LOC100653049A0A140TA62 436 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 KRT34O76011 436 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 ART3Q13508 389 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 RBBP5Q15291 538 aaKnown RBP17.01■□□□□ 0.31
PRDM8-201ENST00000339711 UNC45BQ8IWX7 931 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 MCRS1Q96EZ8 462 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 LPIN3Q9BQK8 851 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 CCDC68Q9H2F9 335 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 NOD2Q9HC29 1040 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 FAM53CQ9NYF3 392 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 CTNNAL1Q9UBT7 734 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 CNTN6Q9UQ52 1028 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 Q9Y3F1 56 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 SSC5DA1L4H1 1573 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 ENO4A6NNW6 628 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 RPL9P32969 192 aaKnown RBP17.01■□□□□ 0.31
PRDM8-201ENST00000339711 AUHQ13825 339 aaKnown RBP17.01■□□□□ 0.31
PRDM8-201ENST00000339711 RABGAP1LQ5R372 815 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 SLC26A7Q8TE54 656 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 NKD2Q969F2 451 aaPredicted RBP17.01■□□□□ 0.31
PRDM8-201ENST00000339711 CEP41Q9BYV8 373 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 CXorf56Q9H5V9 222 aa17.01■□□□□ 0.31
PRDM8-201ENST00000339711 RBM47A0AV96 593 aaKnown RBP17■□□□□ 0.31
PRDM8-201ENST00000339711 C2CD4BA6NLJ0 364 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 PURAQ00577 322 aaKnown RBP17■□□□□ 0.31
PRDM8-201ENST00000339711 BFSP2Q13515 415 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 ATPAF2Q8N5M1 289 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 ALKBH8Q96BT7 664 aaKnown RBP17■□□□□ 0.31
PRDM8-201ENST00000339711 XPO1O14980 1071 aaKnown RBP17■□□□□ 0.31
PRDM8-201ENST00000339711 PAPSS1O43252 624 aaPredicted RBP17■□□□□ 0.31
PRDM8-201ENST00000339711 MATKP42679 507 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 NFE2Q16621 373 aaPredicted RBP17■□□□□ 0.31
PRDM8-201ENST00000339711 ZDHHC24Q6UX98 284 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 RGS9BPQ6ZS82 235 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 ZMAT2Q96NC0 199 aaKnown RBP17■□□□□ 0.31
PRDM8-201ENST00000339711 PAFAH2Q99487 392 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 TSSK1BQ9BXA7 367 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 NRDE2Q9H7Z3 1164 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 PCDH18Q9HCL0 1135 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 CDH9Q9ULB4 789 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 MTSS1O43312 755 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 ZNF189O75820 626 aaPredicted RBP17■□□□□ 0.31
PRDM8-201ENST00000339711 PGM1P36871 562 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 FDFT1P37268 417 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 BRCC3P46736 316 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 NR2C2P49116 596 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 CTXN3Q4LDR2 81 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 SH3PXD2AQ5TCZ1 1133 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 AP1ARQ63HQ0 302 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 TMEM130Q8N3G9 435 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 STAMBPL1Q96FJ0 436 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 ZDHHC18Q9NUE0 388 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 PCMTD2Q9NV79 361 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 HAO1Q9UJM8 370 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 L3MBTL1Q9Y468 752 aa17■□□□□ 0.31
PRDM8-201ENST00000339711 TNS1Q9HBL0 1735 aaKnown RBP16.99■□□□□ 0.31
PRDM8-201ENST00000339711 C3orf70A6NLC5 250 aaPredicted RBP16.99■□□□□ 0.31
PRDM8-201ENST00000339711 ATN1P54259 1190 aaPredicted RBP16.99■□□□□ 0.31
PRDM8-201ENST00000339711 FAM228AQ86W67 206 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 LRRN4Q8WUT4 740 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 NDRG1Q92597 394 aaKnown RBP16.99■□□□□ 0.31
PRDM8-201ENST00000339711 COLEC11Q9BWP8 271 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 TULP2O00295 520 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 CYP3A5P20815 502 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 NUMBP49757 651 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 FAM117BQ6P1L5 589 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 SAPCD2Q86UD0 394 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 TTC30AQ86WT1 665 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 KANSL3Q9P2N6 904 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 BCAP29Q9UHQ4 241 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 IPO11Q9UI26 975 aaKnown RBP16.99■□□□□ 0.31
PRDM8-201ENST00000339711 SLC24A2Q9UI40 661 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 KCNK1O00180 336 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 SNRPAP09012 282 aaKnown RBP16.99■□□□□ 0.31
PRDM8-201ENST00000339711 CLCNKBP51801 687 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 MRPS5P82675 430 aaKnown RBP16.99■□□□□ 0.31
PRDM8-201ENST00000339711 HABP4Q5JVS0 413 aaKnown RBP16.99■□□□□ 0.31
PRDM8-201ENST00000339711 MROH9Q5TGP6 573 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 NIPA2Q8N8Q9 360 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 STK32AQ8WU08 396 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 HTR3CQ8WXA8 447 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 ZNF670Q9BS34 389 aa16.99■□□□□ 0.31
PRDM8-201ENST00000339711 SH3BP5O60239 455 aa16.98■□□□□ 0.31
PRDM8-201ENST00000339711 IL1R2P27930 398 aa16.98■□□□□ 0.31
PRDM8-201ENST00000339711 CAPRIN2Q6IMN6 1127 aaKnown RBP16.98■□□□□ 0.31
PRDM8-201ENST00000339711 SLC26A9Q7LBE3 791 aa16.98■□□□□ 0.31
PRDM8-201ENST00000339711 WDTC1Q8N5D0 677 aa16.98■□□□□ 0.31
PRDM8-201ENST00000339711 RMDN2Q96LZ7 410 aa16.98■□□□□ 0.31
PRDM8-201ENST00000339711 TSC22D3Q99576 134 aa16.98■□□□□ 0.31
PRDM8-201ENST00000339711 ADAMTS10Q9H324 1103 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms