RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ZNF668Q96K58 619 aaPredicted RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 TMEM237Q96Q45 408 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 HDHD2Q9H0R4 259 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 INTS13Q9NVM9 706 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 MORF4L1Q9UBU8 362 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 PIPSLA2A3N6 862 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 KLHL18O94889 574 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 LCA5LO95447 670 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 ATP6V1B2P21281 511 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 FMO5P49326 533 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 CHRNB3Q05901 458 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 RAD51Q06609 339 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 TROAPQ12815 778 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 COX10Q12887 443 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 PIGHQ14442 188 aaPredicted RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 NEDD8Q15843 81 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 KCNA10Q16322 511 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 B3GNT6Q6ZMB0 384 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 ANKS3Q6ZW76 656 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 OTOP1Q7RTM1 612 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 LRRC71Q8N4P6 559 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 USP33Q8TEY7 942 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 TRPC7Q9HCX4 862 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 SLC39A10Q9ULF5 831 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 IGSF9BQ9UPX0 1349 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 STX7O15400 261 aaKnown RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 CLASP2O75122 1294 aaKnown RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 RHOBTB3O94955 611 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 LAG3P18627 525 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 CCT3P49368 545 aaKnown RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 EPHB3P54753 998 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 MAPK7Q13164 816 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 ITGADQ13349 1161 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 ZNF235Q14590 738 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 CENPLQ8N0S6 344 aaPredicted RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 RTL3Q8N8U3 475 aaKnown RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 TPCN2Q8NHX9 752 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 DNAJB3Q8WWF6 145 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 TADA1Q96BN2 335 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 ZNF512Q96ME7 567 aaPredicted RBP8.42□□□□□ -1.06
VPS41-202ENST00000310301 BTBD10Q9BSF8 475 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 COPG2Q9UBF2 871 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 HPS5Q9UPZ3 1129 aa8.42□□□□□ -1.06
VPS41-202ENST00000310301 A8MXQ7 604 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 FAM25AB3EWG3 89 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 FAM25CB3EWG5 89 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 FAM25GB3EWG6 89 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 ASGR1P07306 291 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 MAPK10P53779 464 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 ELF3P78545 371 aaPredicted RBP8.41□□□□□ -1.06
VPS41-202ENST00000310301 MRPS6P82932 125 aaKnown RBP8.41□□□□□ -1.06
VPS41-202ENST00000310301 EXOSC10Q01780 885 aaKnown RBP8.41□□□□□ -1.06
VPS41-202ENST00000310301 MMRN1Q13201 1228 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 SGO1Q5FBB7 561 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 SPATA18Q8TC71 538 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 DEPDC7Q96QD5 511 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 MCOLN1Q9GZU1 580 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 IGFLR1Q9H665 355 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.41□□□□□ -1.06
VPS41-202ENST00000310301 ZNF112Q9UJU3 913 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 ATRNL1Q5VV63 1379 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 GOLGA8TH3BQL2 631 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 FSBPO95073 299 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 NPTXRO95502 500 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 PLIN5Q00G26 463 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 TRAF2Q12933 501 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 ITGB3BPQ13352 177 aaPredicted RBP8.41□□□□□ -1.06
VPS41-202ENST00000310301 PDZK1Q5T2W1 519 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 PDPK2PQ6A1A2 396 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 FAM71DQ8N9W8 422 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 STK32AQ8WU08 396 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 USP13Q92995 863 aaPredicted RBP8.41□□□□□ -1.06
VPS41-202ENST00000310301 SLITRK1Q96PX8 696 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 C7orf25Q9BPX7 421 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 SPON2Q9BUD6 331 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 PLEKHA5Q9HAU0 1116 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 DNAJC16Q9Y2G8 782 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 KRT6BP04259 564 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 THP07101 528 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 PLEKP08567 350 aaPredicted RBP8.41□□□□□ -1.06
VPS41-202ENST00000310301 PECAM1P16284 738 aaPredicted RBP8.41□□□□□ -1.06
VPS41-202ENST00000310301 PPP3CCP48454 512 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 KRT6CP48668 564 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 SLC16A1P53985 500 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 STILQ15468 1287 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 PPP2R2DQ66LE6 453 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 VSIG10LQ86VR7 867 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 FAM81AQ8TBF8 368 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 CAVIN3Q969G5 261 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 TRIM39Q9HCM9 518 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 SH3BP1Q9Y3L3 701 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 PKP3Q9Y446 797 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 ADCY6O43306 1168 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 MED26O95402 600 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 EPHB2P29323 1055 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 NME5P56597 212 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 HTRA3P83110 453 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 TRIQKQ629K1 86 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 SYTL1Q8IYJ3 562 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms