RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 RSPH3Q86UC2 560 aa25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 CRLF3Q8IUI8 442 aa25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 GSDMBQ8TAX9 411 aa25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 C18orf25Q96B23 403 aaPredicted RBP25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 SEPT10Q9P0V9 454 aa25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 SIRPGQ9P1W8 387 aa25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 BCLAF3A2AJT9 711 aaKnown RBP25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 BAG2O95816 211 aa25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 TGM2P21980 687 aa25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 RBP5P82980 135 aa25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 SOWAHAQ2M3V2 549 aa25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 LGSNQ5TDP6 509 aa25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 EFCAB3Q8N7B9 438 aa25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 CFAP61Q8NHU2 1237 aa25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 ZMAT2Q96NC0 199 aaKnown RBP25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 KCNK4Q9NYG8 393 aa25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 TUBGCP4Q9UGJ1 667 aa25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 HBS1LQ9Y450 684 aaKnown RBP25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 MCF2P10911 925 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 GOT1P17174 413 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 L1CAMP32004 1257 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 KLC1Q07866 573 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 STX3Q13277 289 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 PEX6Q13608 980 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 ATG16L1Q676U5 607 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 FAM131BQ86XD5 332 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 USP6NLQ92738 828 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 DDX50Q9BQ39 737 aaKnown RBP25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 EME2A4GXA9 379 aaPredicted RBP25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 NPTXRO95502 500 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 LMNAP02545 664 aaKnown RBP25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 BPGMP07738 259 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 VAV1P15498 845 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 ACADSP16219 412 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 KCTD2Q14681 263 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 FASTKD1Q53R41 847 aaKnown RBP25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 TP53INP2Q8IXH6 220 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 PANX3Q96QZ0 392 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 TUBB6Q9BUF5 446 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 ACSS2Q9NR19 701 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 ZNF358Q9NW07 568 aa25.2■■□□□ 1.62
SPTSSA-201ENST00000298130 CCDC189A1A4V9 331 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 ATICP31939 592 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 ABCG1P45844 678 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 SLC25A3Q00325 362 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 INCA1Q0VD86 236 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 VWA5B1Q5TIE3 1220 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 RNF220Q5VTB9 566 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 RIPOR1Q6ZS17 1223 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 PHC3Q8NDX5 983 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 ZNF778Q96MU6 729 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 C7orf26Q96N11 449 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 KCTD15Q96SI1 283 aaPredicted RBP25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 PIDD1Q9HB75 910 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 KRT82Q9NSB4 513 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 RBPJLQ9UBG7 517 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 SCN1AP35498 2009 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 A6NJR5 290 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 C6orf222P0C671 652 aaPredicted RBP25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 PSEN1P49768 467 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 NOL9Q5SY16 702 aaKnown RBP25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 RTP4Q96DX8 246 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 ASB7Q9H672 318 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 SNTG2Q9NY99 539 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 ERAP1Q9NZ08 941 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 GPRC5DQ9NZD1 345 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 ZNF180Q9UJW8 692 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 AP4E1Q9UPM8 1137 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 DNAJC16Q9Y2G8 782 aa25.19■■□□□ 1.62
SPTSSA-201ENST00000298130 KLF11O14901 512 aa25.18■■□□□ 1.62
SPTSSA-201ENST00000298130 PITX1P78337 314 aaPredicted RBP25.18■■□□□ 1.62
SPTSSA-201ENST00000298130 ZNF618Q5T7W0 954 aa25.18■■□□□ 1.62
SPTSSA-201ENST00000298130 N4BP2L1Q5TBK1 243 aaPredicted RBP25.18■■□□□ 1.62
SPTSSA-201ENST00000298130 HESX1Q9UBX0 185 aa25.18■■□□□ 1.62
SPTSSA-201ENST00000298130 SLC7A8Q9UHI5 535 aa25.18■■□□□ 1.62
SPTSSA-201ENST00000298130 CSADQ9Y600 493 aa25.18■■□□□ 1.62
SPTSSA-201ENST00000298130 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.18■■□□□ 1.62
SPTSSA-201ENST00000298130 FAM159BA6NKW6 160 aa25.18■■□□□ 1.62
SPTSSA-201ENST00000298130 TPP1O14773 563 aa25.18■■□□□ 1.62
SPTSSA-201ENST00000298130 LRRC36Q1X8D7 754 aa25.18■■□□□ 1.62
SPTSSA-201ENST00000298130 HEATR6Q6AI08 1181 aaKnown RBP25.18■■□□□ 1.62
SPTSSA-201ENST00000298130 SESTD1Q86VW0 696 aa25.18■■□□□ 1.62
SPTSSA-201ENST00000298130 SCUBE1Q8IWY4 988 aa25.18■■□□□ 1.62
SPTSSA-201ENST00000298130 MTMR10Q9NXD2 777 aa25.18■■□□□ 1.62
SPTSSA-201ENST00000298130 DTLQ9NZJ0 730 aa25.18■■□□□ 1.62
SPTSSA-201ENST00000298130 TRDMT1O14717 391 aaKnown RBP25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 MGAT1P26572 445 aa25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 KIZQ2M2Z5 673 aa25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 ULK2Q8IYT8 1036 aa25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 SLC35F5Q8WV83 523 aa25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 FAM136AQ96C01 138 aa25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 MOCOSQ96EN8 888 aa25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 WWP1Q9H0M0 922 aa25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 XAB2Q9HCS7 855 aaKnown RBP25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 ALDOAP04075 364 aaKnown RBP25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 LGALS2P05162 132 aa25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 UBTFL6P0CB48 400 aaPredicted RBP25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 LMO2P25791 158 aa25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 CCNFP41002 786 aa25.17■■□□□ 1.62
SPTSSA-201ENST00000298130 RABGGTBP53611 331 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms