RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 TRUB2O95900 331 aaKnown RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 C4BPAP04003 597 aaKnown RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 MUTP22033 750 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 BST2Q10589 180 aaKnown RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 PEX6Q13608 980 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 DDX53Q86TM3 631 aaKnown RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 RIOX2Q8IUF8 465 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 TRIML2Q8N7C3 387 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 PLEKHO2Q8TD55 490 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SERPINI1Q99574 410 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 TSC22D3Q99576 134 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SYT15Q9BQS2 421 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 LATS2Q9NRM7 1088 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 BAG5Q9UL15 447 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 TRIP11Q15643 1979 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SLC12A8A0AV02 714 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 MSI1O43347 362 aaKnown RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 E2F6O75461 281 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 NDUFS3O75489 264 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 LYPLA1O75608 230 aaPredicted RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 VAPBO95292 243 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 ODC1P11926 461 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 YBX3P16989 372 aaKnown RBP eCLIP4.92□□□□□ -1.622e-6■■□□□ 13
UBR1-201ENST00000290650 GDF10P55107 478 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 OLIG2Q13516 323 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 CNGA3Q16281 694 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 RNF219Q5W0B1 726 aaPredicted RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 MTHFD1LQ6UB35 978 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 CARNMT1Q8N4J0 409 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 C3orf20Q8ND61 904 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SLC16A10Q8TF71 515 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SRPK1Q96SB4 655 aaKnown RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 KATNAL1Q9BW62 490 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 ABCG8Q9H221 673 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 PCDH9Q9HC56 1237 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 CD274Q9NZQ7 290 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 STOML1Q9UBI4 398 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 MOXD2PA6NHM9 499 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 CBX4O00257 560 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 AKAP10O43572 662 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SERPIND1P05546 499 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SPATA31D3P0C874 917 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 LMO2P25791 158 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 FSCN1Q16658 493 aaKnown RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 SPATA31D4Q6ZUB0 917 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 NIPA1Q7RTP0 329 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 GPR142Q7Z601 462 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SAMD3Q8N6K7 520 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SPDYE1Q8NFV5 336 aaPredicted RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 SDCCAG3Q96C92 435 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 MTBPQ96DY7 904 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 MFSD14AQ96MC6 490 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 XPNPEP1Q9NQW7 623 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 RBM22Q9NW64 420 aaKnown RBP eCLIP4.92□□□□□ -1.62
UBR1-201ENST00000290650 MAP3K20Q9NYL2 800 aaKnown RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 MPP6Q9NZW5 540 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 THEGQ9P2T0 379 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 GRID1Q9ULK0 1009 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 TOGARAM1Q9Y4F4 1720 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 TTC24A2A3L6 582 aaPredicted RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 RRN3P2A6NIE6 340 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 XPO1O14980 1071 aaKnown RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 MAFO75444 373 aaPredicted RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 KATNA1O75449 491 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 LTFP02788 710 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 ELNP15502 786 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 PCSK1P29120 753 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SPRP35270 261 aaPredicted RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 SCNN1BP51168 640 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 PTK6Q13882 451 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 BMT2Q1RMZ1 405 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 FAM171A1Q5VUB5 890 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SLC27A1Q6PCB7 646 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 FUKQ8N0W3 1084 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 AZIN2Q96A70 460 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 GRAMD1AQ96CP6 724 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SENP8Q96LD8 212 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 ADAM2Q99965 735 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 Q9H521 79 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 YY1AP1Q9H869 796 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 PTPRJQ12913 1337 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 MYO7AQ13402 2215 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 CCL22O00626 93 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 MDM4O15151 490 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 CCDC22O60826 627 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 LGR5O75473 907 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 ATP5HO75947 161 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 TGFB3P10600 412 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 KCNA3P22001 575 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 PBLDP30039 288 aaPredicted RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 BRCC3P46736 316 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SLC6A3Q01959 620 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 CTXN3Q4LDR2 81 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 SLC41A1Q8IVJ1 513 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 ST13P5Q8NFI4 369 aaPredicted RBP4.92□□□□□ -1.62
UBR1-201ENST00000290650 CYGBQ8WWM9 190 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 HTR3CQ8WXA8 447 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 CCDC138Q96M89 665 aa4.92□□□□□ -1.62
UBR1-201ENST00000290650 GPR20Q99678 358 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms