RNA–Protein interactions for RNA: ENST00000284273.5

UBASH3B-201, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBASH3B, Length 6,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-201ENST00000284273 TBC1D3EA0A087X179 549 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 TBC1D3KA0A087X1G2 549 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 TRAV19A0A0A6YYK7 116 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 TBC1D3FA6NER0 549 aaPredicted RBP12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 TBC1D3LB9A6J9 549 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 TBC1D3HP0C7X1 549 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 CTPS1P17812 591 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 AMPD1P23109 780 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 CCR1P32246 355 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 BMPR2Q13873 1038 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 TBC1D3GQ6DHY5 549 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 TBC1D3CQ6IPX1 549 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 TBC1D3Q8IZP1 549 aaPredicted RBP12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 FBXO36Q8NEA4 188 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 CAMKK2Q96RR4 588 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 KLHL25Q9H0H3 589 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 ELL3Q9HB65 397 aaPredicted RBP12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 RBAK-RBAKDNI3L0D1 243 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 PEX10O60683 326 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 DAB1O75553 588 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 SNRPAP09012 282 aaKnown RBP12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 PEX5P50542 639 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 TRAF2Q12933 501 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 C16orf89Q6UX73 402 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 SOCS4Q8WXH5 440 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 MANSC1Q9H8J5 431 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 ARHGEF3Q9NR81 526 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 PLK2Q9NYY3 685 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 SNX6Q9UNH7 406 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 GAS2O43903 313 aaKnown RBP12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 TOMM70O94826 608 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 SRGNP10124 158 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 VDRP11473 427 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 DEFB119Q8N690 84 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 UTP15Q8TED0 518 aaKnown RBP12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 FIG4Q92562 907 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 CASP10Q92851 521 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 ZNF558Q96NG5 402 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 UVRAGQ9P2Y5 699 aa12.18□□□□□ -0.46
UBASH3B-201ENST00000284273 NEDD8-MDP1E9PL57 170 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 PYGMP11217 842 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 ALAS2P22557 587 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 CD52P31358 61 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 OTUD4Q01804 1114 aaKnown RBP12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 PPIL6Q8IXY8 311 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 PACSIN1Q9BY11 444 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 TLE6Q9H808 572 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 ZNF112Q9UJU3 913 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 DDX3XO00571 662 aaKnown RBP eCLIP12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 USP12O75317 370 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 ACRP10323 421 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 NFYCQ13952 458 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 NR6A1Q15406 480 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 PSRC1Q6PGN9 363 aaPredicted RBP12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 ADGRA1Q86SQ6 560 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 HTATIP2Q9BUP3 242 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 ASAH2Q9NR71 780 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 ARHGEF40Q8TER5 1519 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 CYP11B2P19099 503 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 KLHDC7AQ5VTJ3 777 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 GPC2Q8N158 579 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 CXorf40BQ96DE9 158 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 ZDHHC15Q96MV8 337 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 BRD9Q9H8M2 597 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 CTNNAL1Q9UBT7 734 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 RNF17Q9BXT8 1623 aaKnown RBP12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 H0Y858 1186 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 ZNF23P17027 643 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 TGM3Q08188 693 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 FGD3Q5JSP0 725 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 RNF31Q96EP0 1072 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 TKTL2Q9H0I9 626 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 SYBUQ9NX95 663 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 TMCC3Q9ULS5 477 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 KLHL20Q9Y2M5 609 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 ERCC6L2Q5T890 1561 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 KLHL41O60662 606 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 IGSF6O95976 241 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 FXR1P51114 621 aaKnown RBP eCLIP12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 CRTC3Q6UUV7 619 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 SGMS1Q86VZ5 419 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 REPS2Q8NFH8 660 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 E2F7Q96AV8 911 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 GMCL1Q96IK5 515 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 ABCA8O94911 1581 aa12.17□□□□□ -0.46
UBASH3B-201ENST00000284273 WDR27A2RRH5 827 aa12.16□□□□□ -0.46
UBASH3B-201ENST00000284273 IRF6O14896 467 aa12.16□□□□□ -0.46
UBASH3B-201ENST00000284273 KIF1CO43896 1103 aaKnown RBP12.16□□□□□ -0.46
UBASH3B-201ENST00000284273 ATP6V1B1P15313 513 aa12.16□□□□□ -0.46
UBASH3B-201ENST00000284273 CDH2P19022 906 aaPredicted RBP12.16□□□□□ -0.46
UBASH3B-201ENST00000284273 NFKB1P19838 968 aa12.16□□□□□ -0.46
UBASH3B-201ENST00000284273 ABL2P42684 1182 aa12.16□□□□□ -0.46
UBASH3B-201ENST00000284273 ANTXR2P58335 489 aa12.16□□□□□ -0.46
UBASH3B-201ENST00000284273 CYP24A1Q07973 514 aa12.16□□□□□ -0.46
UBASH3B-201ENST00000284273 DGKKQ5KSL6 1271 aa12.16□□□□□ -0.46
UBASH3B-201ENST00000284273 MARC1Q5VT66 337 aa12.16□□□□□ -0.46
UBASH3B-201ENST00000284273 RHOBTB2Q9BYZ6 727 aa12.16□□□□□ -0.46
UBASH3B-201ENST00000284273 GALNT8Q9NY28 637 aa12.16□□□□□ -0.46
UBASH3B-201ENST00000284273 FAM50BQ9Y247 325 aa12.16□□□□□ -0.46
UBASH3B-201ENST00000284273 B2RBV5 119 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms