RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 MRPL45Q9BRJ2 306 aaKnown RBP12.88□□□□□ -0.35
BEST3-201ENST00000266661 TRIM56Q9BRZ2 755 aaKnown RBP12.88□□□□□ -0.35
BEST3-201ENST00000266661 C20orf27Q9GZN8 174 aa12.88□□□□□ -0.35
BEST3-201ENST00000266661 CXCL16Q9H2A7 254 aa12.88□□□□□ -0.35
BEST3-201ENST00000266661 HESX1Q9UBX0 185 aa12.88□□□□□ -0.35
BEST3-201ENST00000266661 PLA2G4CQ9UP65 541 aa12.88□□□□□ -0.35
BEST3-201ENST00000266661 HEY1Q9Y5J3 304 aa12.88□□□□□ -0.35
BEST3-201ENST00000266661 USP3Q9Y6I4 520 aa12.88□□□□□ -0.35
BEST3-201ENST00000266661 EVPLQ92817 2033 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 CYB561D2O14569 222 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 BIRC5O15392 142 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 GYG2O15488 501 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 CA12O43570 354 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 MAGEC1O60732 1142 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 ALDH1A2O94788 518 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 LGALS2P05162 132 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 BPGMP07738 259 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 APRTP07741 180 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 CYP2F1P24903 491 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 CDC25CP30307 473 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 GRM5P41594 1212 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 GBE1Q04446 702 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 BMPR2Q13873 1038 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 KPNB1Q14974 876 aaKnown RBP12.87□□□□□ -0.35
BEST3-201ENST00000266661 STXBP5Q5T5C0 1151 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 LGSNQ5TDP6 509 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 ARHGAP17Q68EM7 881 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 SCYL2Q6P3W7 929 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 ALYREFQ86V81 257 aaKnown RBP12.87□□□□□ -0.35
BEST3-201ENST00000266661 CDKL3Q8IVW4 592 aaPredicted RBP12.87□□□□□ -0.35
BEST3-201ENST00000266661 CTAGE3PQ8IX95 158 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 ADGRF2Q8IZF7 708 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 ARMC2Q8NEN0 867 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 GSDMBQ8TAX9 411 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 LRRN4Q8WUT4 740 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 WDR60Q8WVS4 1066 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 E2F7Q96AV8 911 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 FAM136AQ96C01 138 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 QKIQ96PU8 341 aaKnown RBP eCLIP12.87□□□□□ -0.35
BEST3-201ENST00000266661 BEGAINQ9BUH8 593 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 MAGEB5Q9BZ81 275 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 ZNF395Q9H8N7 513 aaPredicted RBP12.87□□□□□ -0.35
BEST3-201ENST00000266661 NGRNQ9NPE2 291 aaKnown RBP12.87□□□□□ -0.35
BEST3-201ENST00000266661 PCDHA11Q9Y5I1 949 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 DGKIO75912 1065 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 MAP3K6O95382 1288 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 PAX7P23759 505 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 CTGFP29279 349 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 SDC4P31431 198 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 SCNN1AP37088 669 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 GRIA1P42261 906 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 TTLL4Q14679 1199 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 DBN1Q16643 649 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 NBPF20Q3BBV1 942 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 TAPT1Q6NXT6 567 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 DPH6Q7L8W6 267 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 SESTD1Q86VW0 696 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 ZDHHC17Q8IUH5 632 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 SCUBE3Q8IX30 993 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 ACAP3Q96P50 834 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 MMP19Q99542 508 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 CCDC106Q9BWC9 280 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 B3GNT5Q9BYG0 378 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 ARHGAP39Q9C0H5 1083 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 DERAQ9Y315 318 aa12.87□□□□□ -0.35
BEST3-201ENST00000266661 COL1A2P08123 1366 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 H0Y3Z8 333 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 PPEF2O14830 753 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 KRT36O76013 467 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 KRT38O76015 456 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 VTNP04004 478 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 ATP5BP06576 529 aaKnown RBP12.86□□□□□ -0.35
BEST3-201ENST00000266661 ESRRAP11474 423 aaPredicted RBP12.86□□□□□ -0.35
BEST3-201ENST00000266661 NR2C2P49116 596 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 SERPINB9P50453 376 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 ZBTB16Q05516 673 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 ATG16L1Q676U5 607 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 SLC26A9Q7LBE3 791 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 APBB1IPQ7Z5R6 666 aaPredicted RBP12.86□□□□□ -0.35
BEST3-201ENST00000266661 ACOT1Q86TX2 421 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 VPS52Q8N1B4 723 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 C7orf31Q8N865 590 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 ZMAT2Q96NC0 199 aaKnown RBP12.86□□□□□ -0.35
BEST3-201ENST00000266661 OLFM3Q96PB7 478 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 ZFYVE28Q9HCC9 887 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 ARMCX1Q9P291 453 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 STOML1Q9UBI4 398 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 EMCNQ9ULC0 261 aa12.86□□□□□ -0.35
BEST3-201ENST00000266661 MCM3APO60318 1980 aa12.85□□□□□ -0.35
BEST3-201ENST00000266661 RBM47A0AV96 593 aaKnown RBP12.85□□□□□ -0.35
BEST3-201ENST00000266661 PSMG1O95456 288 aa12.85□□□□□ -0.35
BEST3-201ENST00000266661 MLNP12872 115 aa12.85□□□□□ -0.35
BEST3-201ENST00000266661 ZFXP17010 805 aaPredicted RBP12.85□□□□□ -0.35
BEST3-201ENST00000266661 LBX1P52954 281 aa12.85□□□□□ -0.35
BEST3-201ENST00000266661 ATXN1P54253 815 aaKnown RBP12.85□□□□□ -0.35
BEST3-201ENST00000266661 IGBP1P78318 339 aa12.85□□□□□ -0.35
BEST3-201ENST00000266661 NIPAL4Q0D2K0 466 aa12.85□□□□□ -0.35
BEST3-201ENST00000266661 TUBB3Q13509 450 aa12.85□□□□□ -0.35
BEST3-201ENST00000266661 KCTD2Q14681 263 aa12.85□□□□□ -0.35
BEST3-201ENST00000266661 CHI3L2Q15782 390 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms