RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PLIN3O60664 434 aa12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 APRTP07741 180 aa12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 HNRNPCP07910 306 aaKnown RBP eCLIP12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 EIF2AK2P19525 551 aaKnown RBP12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 MX2P20592 715 aa12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 TGM2P21980 687 aa12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 APOFQ13790 326 aa12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 DACT2Q5SW24 774 aa12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 N4BP2L1Q5TBK1 243 aaPredicted RBP12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 ZNF410Q86VK4 478 aa12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 WDR49Q8IV35 697 aa12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 METTL25Q8N6Q8 603 aa12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 OR5B17Q8NGF7 314 aa12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 DEPTORQ8TB45 409 aa12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 ZNF778Q96MU6 729 aa12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 TRIM56Q9BRZ2 755 aaKnown RBP12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 TDRD3Q9H7E2 651 aaKnown RBP12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 VPS28Q9UK41 221 aa12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 CNTNAP2Q9UHC6 1331 aa12.77□□□□□ -0.36
CHMP2B-201ENST00000263780 LOC100653049A0A140TA62 436 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 BCLAF3A2AJT9 711 aaKnown RBP12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 KRT34O76011 436 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 STK10O94804 968 aaKnown RBP12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 ENDOD1O94919 500 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 ZBED1O96006 694 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 ATP6V1B1P15313 513 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 HARS2P49590 506 aaKnown RBP12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 CDH6P55285 790 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 ABCE1P61221 599 aaKnown RBP12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 RPL10AP62906 217 aaKnown RBP12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 COG7P83436 770 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 TMED1Q13445 227 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 SURF1Q15526 300 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 PTPN20Q4JDL3 420 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 TSHZ1Q6ZSZ6 1077 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 FRMD7Q6ZUT3 714 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 ILDR2Q71H61 639 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 CEP70Q8NHQ1 597 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 USP6NLQ92738 828 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 MASTLQ96GX5 879 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 CNBD2Q96M20 576 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 SENP6Q9GZR1 1112 aaPredicted RBP12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 XPNPEP1Q9NQW7 623 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 UBAP1Q9NZ09 502 aa12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 CNOT11Q9UKZ1 510 aaKnown RBP12.77□□□□□ -0.37
CHMP2B-201ENST00000263780 hCG_2014768A0A024R1R8 64 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 UGT1A9O60656 530 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 LYPLA1O75608 230 aaPredicted RBP12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 TOMM70O94826 608 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 NPR1P16066 1061 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 CAP2P40123 477 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 NAMPTP43490 491 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 RAB15P59190 212 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 TRPC3Q13507 836 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 PDK2Q15119 407 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 ZNF394Q53GI3 561 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 SETD3Q86TU7 594 aaPredicted RBP12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 RSPH3Q86UC2 560 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 SEPT12Q8IYM1 358 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 SHKBP1Q8TBC3 707 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 ABTB1Q969K4 478 aaPredicted RBP12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 PRPF18Q99633 342 aaKnown RBP12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 DBNDD1Q9H9R9 158 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 UGT1A7Q9HAW7 530 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 UGT1A10Q9HAW8 530 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 UGT1A8Q9HAW9 530 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 FBXO28Q9NVF7 368 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 SEPT9Q9UHD8 586 aaPredicted RBP12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 SQORQ9Y6N5 450 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 HMX2A2RU54 273 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 H0YJX3 145 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 FBXO21O94952 628 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 GSRP00390 522 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 TPSB2P20231 275 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 MAGEA3P43357 314 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 KLF10Q13118 480 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 MTMR2Q13614 643 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 TPSAB1Q15661 275 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 DENND1BQ6P3S1 775 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 NPNTQ6UXI9 565 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 KIAA0319LQ8IZA0 1049 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 GPRASP2Q96D09 838 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 BIRC8Q96P09 236 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 RNF157Q96PX1 679 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 TAAR1Q96RJ0 339 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 PNPOQ9NVS9 261 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 GNEQ9Y223 722 aaKnown RBP12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 TESPA1A2RU30 521 aaPredicted RBP12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 SLC22A2O15244 555 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 DCXO43602 365 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 SORBS2O94875 1100 aaKnown RBP12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 STBD1O95210 358 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 RALBP11234 206 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 TGFB2P61812 414 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 MYBPC1Q00872 1141 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 FLOT2Q14254 428 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 ZYXQ15942 572 aaKnown RBP12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 DUOXA2Q1HG44 320 aa12.76□□□□□ -0.37
CHMP2B-201ENST00000263780 SYCP2LQ5T4T6 812 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms