RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 TCF3P15923 654 aa17.39■□□□□ 0.37
SORT1-201ENST00000256637 TNFSF9P41273 254 aa17.39■□□□□ 0.37
SORT1-201ENST00000256637 BTBD9Q96Q07 612 aa17.39■□□□□ 0.37
SORT1-201ENST00000256637 CYP39A1Q9NYL5 469 aa17.39■□□□□ 0.37
SORT1-201ENST00000256637 FAM205AQ6ZU69 1335 aa17.39■□□□□ 0.37
SORT1-201ENST00000256637 TMED1Q13445 227 aa17.39■□□□□ 0.37
SORT1-201ENST00000256637 SPOCD1Q6ZMY3 1216 aa17.39■□□□□ 0.37
SORT1-201ENST00000256637 CD302Q8IX05 232 aa17.39■□□□□ 0.37
SORT1-201ENST00000256637 SMIM22K7EJ46 135 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 ABL2P42684 1182 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 SLC26A2P50443 739 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 ERMARDQ5T6L9 678 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 IYDQ6PHW0 289 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 SLAIN1Q8ND83 568 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 RNF14Q9UBS8 474 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 AP3B1O00203 1094 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 UMPSP11172 480 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 PPIGQ13427 754 aaKnown RBP eCLIP17.38■□□□□ 0.37
SORT1-201ENST00000256637 CYP51A1Q16850 503 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 NACC2Q96BF6 587 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 ZNF536O15090 1300 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 KLHDC7AQ5VTJ3 777 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 MRNIPQ6NTE8 343 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 LRRC1Q9BTT6 524 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 SETBP1Q9Y6X0 1596 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 PYGBP11216 843 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 PRKAG1P54619 331 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 APBA1Q02410 837 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 EVX2Q03828 476 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 OR14C36Q8NHC7 312 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 USP7Q93009 1102 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 GEMIN8Q9NWZ8 242 aaKnown RBP17.38■□□□□ 0.37
SORT1-201ENST00000256637 TREHO43280 583 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 IRX2Q9BZI1 471 aaPredicted RBP17.38■□□□□ 0.37
SORT1-201ENST00000256637 MED4Q9NPJ6 270 aa17.38■□□□□ 0.37
SORT1-201ENST00000256637 BARX2Q9UMQ3 279 aaPredicted RBP17.38■□□□□ 0.37
SORT1-201ENST00000256637 CTDNEP1O95476 244 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 MMP3P08254 477 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 RPL17P18621 184 aaKnown RBP17.37■□□□□ 0.37
SORT1-201ENST00000256637 SPRP35270 261 aaPredicted RBP17.37■□□□□ 0.37
SORT1-201ENST00000256637 SERPINB5P36952 375 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 MARC1Q5VT66 337 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 YBX3P16989 372 aaKnown RBP eCLIP17.37■□□□□ 0.373e-7■■■□□ 15.2
SORT1-201ENST00000256637 PBX3P40426 434 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 ULBP1Q9BZM6 244 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 PTPN11Q06124 597 aaPredicted RBP17.37■□□□□ 0.37
SORT1-201ENST00000256637 MTFR1Q15390 333 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 CCDC142Q17RM4 750 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 PRRG4Q9BZD6 226 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 ATP6V1HQ9UI12 483 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 DLC1Q96QB1 1528 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 PER2O15055 1255 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 HAUS5O94927 633 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 HOXA7P31268 230 aaPredicted RBP17.37■□□□□ 0.37
SORT1-201ENST00000256637 DHPSP49366 369 aaPredicted RBP17.37■□□□□ 0.37
SORT1-201ENST00000256637 KCNK10P57789 538 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 STX3Q13277 289 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 C16orf72Q14CZ0 275 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 C16orf46Q6P387 395 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 CERS5Q8N5B7 392 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 B3GALT6Q96L58 329 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 ZNF112Q9UJU3 913 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 TYMPP19971 482 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 CYP2C18P33260 490 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 ARMC2Q8NEN0 867 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 ZC3H12AQ5D1E8 599 aaKnown RBP17.37■□□□□ 0.37
SORT1-201ENST00000256637 TMC5Q6UXY8 1006 aa17.37■□□□□ 0.37
SORT1-201ENST00000256637 RNASEH2AO75792 299 aaKnown RBP17.36■□□□□ 0.37
SORT1-201ENST00000256637 CYP11B1P15538 503 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 POU1F1P28069 291 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 CYTH1Q15438 398 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 SLC18A3Q16572 532 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 ATAT1Q5SQI0 421 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 STRA8Q7Z7C7 330 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 IL25Q9H293 177 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 CAAP1Q9H8G2 361 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 DDX20Q9UHI6 824 aaKnown RBP17.36■□□□□ 0.37
SORT1-201ENST00000256637 HPS5Q9UPZ3 1129 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 INVSQ9Y283 1065 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 PABPC1LQ4VXU2 614 aaKnown RBP17.36■□□□□ 0.37
SORT1-201ENST00000256637 HECTD3Q5T447 861 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 DEFB106AQ8N104 65 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 ADSSL1Q8N142 457 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 CPA6Q8N4T0 437 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 POMGNT2Q8NAT1 580 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 ANKRD63C9JTQ0 380 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 RHOBTB3O94955 611 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 GALNT3Q14435 633 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 GALNT4Q8N4A0 578 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 TUBGCP3Q96CW5 907 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 BBS4Q96RK4 519 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 EHD4Q9H223 541 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 ACSL4O60488 711 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 APODP05090 189 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 TGFB3P10600 412 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 SKOR1P84550 965 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 ABRQ12979 859 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 CENPPQ6IPU0 288 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 POMZP3Q6PJE2 187 aa17.36■□□□□ 0.37
SORT1-201ENST00000256637 ARHGEF19Q8IW93 802 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms