RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 GTF2H3Q13889 308 aa20.37■□□□□ 0.85
SOX4-201ENST00000244745 B3GNT6Q6ZMB0 384 aa20.37■□□□□ 0.85
SOX4-201ENST00000244745 CLVS1Q8IUQ0 354 aaPredicted RBP20.37■□□□□ 0.85
SOX4-201ENST00000244745 RIN3Q8TB24 985 aa20.37■□□□□ 0.85
SOX4-201ENST00000244745 PWWP2AQ96N64 755 aa20.37■□□□□ 0.85
SOX4-201ENST00000244745 NCKIPSDQ9NZQ3 722 aa20.37■□□□□ 0.85
SOX4-201ENST00000244745 DUPD1Q68J44 220 aa20.37■□□□□ 0.85
SOX4-201ENST00000244745 OR6Y1Q8NGX8 325 aa20.37■□□□□ 0.85
SOX4-201ENST00000244745 RMND5BQ96G75 393 aaPredicted RBP20.37■□□□□ 0.85
SOX4-201ENST00000244745 HPS4Q9NQG7 708 aa20.37■□□□□ 0.85
SOX4-201ENST00000244745 UBDO15205 165 aa20.37■□□□□ 0.85
SOX4-201ENST00000244745 ASMTLO95671 621 aa20.37■□□□□ 0.85
SOX4-201ENST00000244745 AMPD1P23109 780 aa20.37■□□□□ 0.85
SOX4-201ENST00000244745 HARS2P49590 506 aaKnown RBP20.37■□□□□ 0.85
SOX4-201ENST00000244745 ECM1Q16610 540 aa20.37■□□□□ 0.85
SOX4-201ENST00000244745 QPCTQ16769 361 aa20.37■□□□□ 0.85
SOX4-201ENST00000244745 NPNTQ6UXI9 565 aa20.37■□□□□ 0.85
SOX4-201ENST00000244745 ITGA11Q9UKX5 1188 aa20.37■□□□□ 0.85
SOX4-201ENST00000244745 C17orf102A2RUQ5 167 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 TBC1D12O60347 775 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 MIPP30301 263 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 CEP78Q5JTW2 689 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 HTR3CQ8WXA8 447 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 MMADHCQ9H3L0 296 aaPredicted RBP20.36■□□□□ 0.85
SOX4-201ENST00000244745 RNPEPQ9H4A4 650 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 HEATR9A2RTY3 570 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 FLT3P36888 993 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 NCKAP1LP55160 1127 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 MAMLD1Q13495 774 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 UGT3A1Q6NUS8 523 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 KCNMB4Q86W47 210 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 PYDC1Q8WXC3 89 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 OTUB1Q96FW1 271 aaPredicted RBP20.36■□□□□ 0.85
SOX4-201ENST00000244745 CELF6Q96J87 481 aaKnown RBP20.36■□□□□ 0.85
SOX4-201ENST00000244745 KCTD14Q9BQ13 255 aaPredicted RBP20.36■□□□□ 0.85
SOX4-201ENST00000244745 KCNQ5Q9NR82 932 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 ANKRD26Q9UPS8 1709 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 DMPKQ09013 629 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 POU6F1Q14863 301 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 GRIK5Q16478 980 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 TBCELQ5QJ74 424 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 PTAR1Q7Z6K3 402 aaPredicted RBP20.36■□□□□ 0.85
SOX4-201ENST00000244745 HS6ST3Q8IZP7 471 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 PRELID2Q8N945 189 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 STKLD1Q8NE28 680 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 LSM7Q9UK45 103 aaKnown RBP20.36■□□□□ 0.85
SOX4-201ENST00000244745 HMGCRP04035 888 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 CYP3A4P08684 503 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 RPRD1AQ96P16 312 aaPredicted RBP20.36■□□□□ 0.85
SOX4-201ENST00000244745 CPNE1Q99829 537 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 SYBUQ9NX95 663 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 PCDHB8Q9UN66 801 aa20.36■□□□□ 0.85
SOX4-201ENST00000244745 C2orf81A6NN90 581 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 STX7O15400 261 aaKnown RBP20.35■□□□□ 0.85
SOX4-201ENST00000244745 ATP6V1B2P21281 511 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 RPS12P25398 132 aaKnown RBP20.35■□□□□ 0.85
SOX4-201ENST00000244745 ROR2Q01974 943 aaKnown RBP20.35■□□□□ 0.85
SOX4-201ENST00000244745 CACHD1Q5VU97 1274 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 RNF148Q8N7C7 305 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 SPATA20Q8TB22 786 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 TKTL1P51854 596 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 SPANXN3Q5MJ09 141 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 PHF21BQ96EK2 531 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 SNTG2Q9NY99 539 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 BCL9O00512 1426 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 C1orf232A0A0U1RR37 186 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 LIASO43766 372 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 C21orf59P57076 290 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 CHRNB3Q05901 458 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 C16orf46Q6P387 395 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 SH3GL1Q99961 368 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 CRLS1Q9UJA2 301 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 DRG1Q9Y295 367 aaKnown RBP20.35■□□□□ 0.85
SOX4-201ENST00000244745 RBP1P09455 135 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 DDX5P17844 614 aaKnown RBP20.35■□□□□ 0.85
SOX4-201ENST00000244745 GP5P40197 560 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 SCUBE3Q8IX30 993 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 ATRNO75882 1429 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 WBP4O75554 376 aaKnown RBP20.35■□□□□ 0.85
SOX4-201ENST00000244745 BCL10O95999 233 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 ZNF286BP0CG31 522 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 RBL1P28749 1068 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 ARHGEF7Q14155 803 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 AARS2Q5JTZ9 985 aaKnown RBP20.35■□□□□ 0.85
SOX4-201ENST00000244745 PARK7Q99497 189 aaKnown RBP20.35■□□□□ 0.85
SOX4-201ENST00000244745 GORASP1Q9BQQ3 440 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 CYLDQ9NQC7 956 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 DYRK4Q9NR20 520 aa20.35■□□□□ 0.85
SOX4-201ENST00000244745 GAKO14976 1311 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 FAM237BA0A1B0GVD1 139 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 KDELR1P24390 212 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 NIPA1Q7RTP0 329 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 PPP1R10Q96QC0 940 aaKnown RBP20.34■□□□□ 0.85
SOX4-201ENST00000244745 CPT1AP50416 773 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 MMRN1Q13201 1228 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 RIPOR1Q6ZS17 1223 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 NT5MQ9NPB1 228 aa20.34■□□□□ 0.85
SOX4-201ENST00000244745 KPNA4O00629 521 aaPredicted RBP20.34■□□□□ 0.85
SOX4-201ENST00000244745 LZTS3O60299 673 aaPredicted RBP20.34■□□□□ 0.85
SOX4-201ENST00000244745 F9P00740 461 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms